RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 S100A9P06702 114 aaKnown RBP7.86□□□□□ -1.15
UBE4B-210ENST00000488228 DEFB130BP0DP73 79 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 DEFB130AP0DP74 79 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 TCL1AP56279 114 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 DAD1P61803 113 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 TDRG1Q3Y452 100 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 PHLDA1Q8WV24 401 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-210ENST00000488228 MED9Q9NWA0 146 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 MDFICQ9P1T7 246 aa7.86□□□□□ -1.15
UBE4B-210ENST00000488228 TIMM8BQ9Y5J9 83 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-210ENST00000488228 DNAH1Q9P2D7 4330 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 TRBV20OR9-2A0A075B6H5 130 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 TRGV11A0A075B6L2 103 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 NUPR2A6NF83 97 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 PGPEP1LA6NFU8 196 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 M0R036 132 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 GNRH2O43555 120 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 HTN3P15516 51 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 CRIP1P50238 77 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 CEBPGP53567 150 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
UBE4B-210ENST00000488228 FAM162BQ5T6X4 162 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 Q6ZTI0 123 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 BAGE2Q86Y30 109 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 SDF2L1Q9HCN8 221 aa7.85□□□□□ -1.15
UBE4B-210ENST00000488228 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
UBE4B-210ENST00000488228 TRGV1A0A0A0MS02 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GAGE12BA1L429 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GAGE7O76087 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GAGE12FP0CL80 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GAGE12GP0CL81 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GAGE12IP0CL82 117 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 GNG4P50150 75 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 ZNF674Q2M3X9 581 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 COX8CQ7Z4L0 72 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 MLST8Q9BVC4 326 aa7.84□□□□□ -1.15
UBE4B-210ENST00000488228 EIF5A2Q9GZV4 153 aaKnown RBP7.84□□□□□ -1.15
UBE4B-210ENST00000488228 KMT2CQ8NEZ4 4911 aaKnown RBP7.84□□□□□ -1.15
UBE4B-210ENST00000488228 TMSB15BA0A087X1C1 80 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 TRAV10A0A0B4J240 114 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 IGKV3D-20A0A0C4DH25 116 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 ORM1P02763 201 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 MGST1P10620 155 aaKnown RBP7.83□□□□□ -1.16
UBE4B-210ENST00000488228 IFITM2Q01629 132 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 DAZ2Q13117 558 aaKnown RBP7.83□□□□□ -1.16
UBE4B-210ENST00000488228 CEMP1Q6PRD7 247 aaPredicted RBP7.83□□□□□ -1.16
UBE4B-210ENST00000488228 LINC00612Q8N6U2 182 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 PARLQ9H300 379 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 LYSTQ99698 3801 aa7.83□□□□□ -1.16
UBE4B-210ENST00000488228 B4DEV8 164 aa7.82□□□□□ -1.16
UBE4B-210ENST00000488228 TMEM250H0YL14 139 aa7.82□□□□□ -1.16
UBE4B-210ENST00000488228 SPINK4O60575 86 aa7.82□□□□□ -1.16
UBE4B-210ENST00000488228 RPL19P84098 196 aaKnown RBP7.82□□□□□ -1.16
UBE4B-210ENST00000488228 SRSF3P84103 164 aaKnown RBP7.82□□□□□ -1.16
UBE4B-210ENST00000488228 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
UBE4B-210ENST00000488228 GRIFINA4D1Z8 144 aa7.81□□□□□ -1.16
UBE4B-210ENST00000488228 KRBOX1C9JBD0 128 aa7.81□□□□□ -1.16
UBE4B-210ENST00000488228 H3BVH4 76 aa7.81□□□□□ -1.16
UBE4B-210ENST00000488228 SRP19P09132 144 aaKnown RBP7.81□□□□□ -1.16
UBE4B-210ENST00000488228 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
UBE4B-210ENST00000488228 TRGV2A0A075B6R0 118 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 IGLL5B9A064 214 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 C9JCJ5 164 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 C9JQL5 133 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 IGHV3-53P01767 116 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 ATP5G1P05496 136 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 RNASE3P12724 160 aaKnown RBP7.8□□□□□ -1.16
UBE4B-210ENST00000488228 ASIPP42127 132 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 RAB14P61106 215 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 OR5I1Q13606 314 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
UBE4B-210ENST00000488228 KLK5Q9Y337 293 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-210ENST00000488228 RYR2Q92736 4967 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 IGHV4-4A0A075B6R2 117 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 F5H768 121 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 K7EN84 100 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 HOXA5P20719 270 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 SMIM12Q96EX1 92 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 SPXQ9BT56 116 aa7.79□□□□□ -1.16
UBE4B-210ENST00000488228 M0R2P5 195 aa7.78□□□□□ -1.16
UBE4B-210ENST00000488228 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
UBE4B-210ENST00000488228 LGALS9BQ3B8N2 356 aa7.78□□□□□ -1.16
UBE4B-210ENST00000488228 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
UBE4B-210ENST00000488228 TMEM88Q6PEY1 159 aa7.78□□□□□ -1.16
UBE4B-210ENST00000488228 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
UBE4B-210ENST00000488228 C19orf71A6NCJ1 209 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 ZNF727A8MUV8 499 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 NDUFS6O75380 124 aaKnown RBP7.77□□□□□ -1.17
UBE4B-210ENST00000488228 SFTA3P0C7M3 94 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 GZMBP10144 247 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 PEA15Q15121 130 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms