RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 NAV3Q8IVL0 2385 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 ACANP16112 2415 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 OTOGQ6ZRI0 2925 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 NBPF19A0A087WUL8 3843 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 A8MU10 97 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 LINC00587B1AMM8 73 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 TGOLN2O43493 480 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 BRI3O95415 125 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 IGHG2P01859 326 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 REG1AP05451 166 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 CRYBA1P05813 215 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 DNAH10OSP0CZ25 163 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 APELAP0DMC3 54 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 DEFA4P12838 97 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 HIST1H1BP16401 226 aaKnown RBP2.61□□□□□ -1.99
PTCD3-216ENST00000487043 ATP6V0CP27449 155 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 S100A2P29034 98 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 SERF2P84101 59 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 UNQ5815/PRO19632Q6UWF5 114 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 TMEM144Q7Z5S9 345 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 SIGLECL1Q8N7X8 197 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 OR5T1Q8NG75 326 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 GNPNAT1Q96EK6 184 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-216ENST00000487043 SMR3AQ99954 134 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 HSPB9Q9BQS6 159 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 PSMG3Q9BT73 122 aaPredicted RBP2.61□□□□□ -1.99
PTCD3-216ENST00000487043 TMEM147Q9BVK8 224 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 WDR61Q9GZS3 305 aaKnown RBP2.61□□□□□ -1.99
PTCD3-216ENST00000487043 TREM1Q9NP99 234 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 VPREB3Q9UKI3 123 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 TIMM9Q9Y5J7 89 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 BAHCC1Q9P281 2608 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 VPS13CQ709C8 3753 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 CSMD1Q96PZ7 3565 aa2.61□□□□□ -1.99
PTCD3-216ENST00000487043 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 TLN2Q9Y4G6 2542 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 IGLV1-50A0A075B6I6 118 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 IGKV1OR2-108A0A075B7D4 117 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 TRAV41A0A0B4J266 112 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 UBE2L5PA0A1B0GUS4 154 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 COLCA2A8K830 154 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 UMAD1C9J7I0 102 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 C17orf112F2Z3M2 114 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 G3V318 75 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 TSTD3H0UI37 97 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 CLDN34H7C241 214 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 I3L2K1 104 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 CYB5BO43169 146 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 MT-CO2P00403 227 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 PRH1P02810 166 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 FGF7P21781 194 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 OPRK1P41145 380 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SULT1A2P50226 295 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 TAS2R60P59551 318 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RPL23P62829 140 aaKnown RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RUNX1Q01196 453 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RPL18AQ02543 176 aaKnown RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RAB31Q13636 194 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 VAMP3Q15836 100 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 DEFB116Q30KQ4 102 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 Q6ZVH6 145 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SLC16A13Q7RTY0 426 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SLC35E3Q7Z769 313 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 Q8N2B8 174 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 NECAP1Q8NC96 275 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 OR4X1Q8NH49 305 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RXFP4Q8TDU9 374 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RSG1Q9BU20 258 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 TMEM243Q9BU79 118 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 NPCDR1Q9BY65 106 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SLC25A39Q9BZJ4 359 aaPredicted RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SH3BGRL3Q9H299 93 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SMDT1Q9H4I9 107 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RPP21Q9H633 154 aaKnown RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 PARP11Q9NR21 331 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 ANAPC11Q9NYG5 84 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 MRPL36Q9P0J6 103 aaKnown RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 RFNGQ9Y644 331 aa2.6□□□□□ -1.99
PTCD3-216ENST00000487043 SETXQ7Z333 2677 aaKnown RBP2.6□□□□□ -1.99
PTCD3-216ENST00000487043 HIVEP1P15822 2718 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 IGKV1D-37A0A075B6S9 117 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 TRAV30A0A087WSZ9 112 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 IGHV3-21A0A0B4J1V1 117 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 TCRBV4S1A1TA0A5B7 111 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 SEC14L6B5MCN3 397 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 H3BUA1 57 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 K7EIM0 57 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 K7EN84 100 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 LINC00869P0C866 280 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 OR10J1P30954 320 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 YPEL3P61236 119 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-216ENST00000487043 PKIAP61925 76 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 RHOGP84095 191 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 AKR1C1Q04828 323 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 FABP9Q0Z7S8 132 aa2.59□□□□□ -1.99
PTCD3-216ENST00000487043 RHEBQ15382 184 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms