RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 V9GYH0 126 aa7.04□□□□□ -1.28
SMARCC1-205ENST00000483847 IGKV2D-24A0A075B6R9 120 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 C5orf51A6NDU8 294 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 FAM24AA6NFZ4 105 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 L7N2F9 121 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 TYMSP04818 313 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 OR10J4P0C629 311 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 BCAP31P51572 246 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 VAMP2P63027 116 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 ODF1Q14990 250 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 FXYD5Q96DB9 178 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 C20orf85Q9H1P6 137 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 C11orf1Q9H5F2 150 aa7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 LSM5Q9Y4Y9 91 aaKnown RBP7.03□□□□□ -1.28
SMARCC1-205ENST00000483847 RBAKDNA6NC62 111 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 GGTLC3B5MD39 225 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 CCSO14618 274 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 NDUFB6O95139 128 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 FGF7P21781 194 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 ZNF876PQ49A33 203 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 OR51M1Q9H341 326 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 RPH3ALQ9UNE2 315 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 COX11Q9Y6N1 276 aa7.02□□□□□ -1.29
SMARCC1-205ENST00000483847 RANP62826 216 aaKnown RBP7.01□□□□□ -1.29
SMARCC1-205ENST00000483847 CHAC2Q8WUX2 184 aa7.01□□□□□ -1.29
SMARCC1-205ENST00000483847 Q9UF83 564 aa7.01□□□□□ -1.29
SMARCC1-205ENST00000483847 IGSF23A1L1A6 192 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 GAGE12JA6NER3 117 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 DIRC3C9JPN6 131 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 PANO1I0J062 215 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 LINC00694P0DN24 101 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 CSN1S1P47710 185 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 GAGE1Q13065 139 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 GAGE4Q13068 117 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 GAGE5Q13069 117 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 GAGE13Q4V321 117 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 Q6ZRU5 148 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 DEDD2Q8WXF8 326 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 RMI2Q96E14 147 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 TVP23CQ96ET8 276 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 PAXXQ9BUH6 204 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 SDF2L1Q9HCN8 221 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 LENEPQ9Y5L5 61 aa7□□□□□ -1.29
SMARCC1-205ENST00000483847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
SMARCC1-205ENST00000483847 TRAV8-1A0A0A6YYK1 113 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 F6UZH7 168 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 S100A11P31949 105 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 SULT1A1P50225 295 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 MITD1Q8WV92 249 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 KLK12Q9UKR0 248 aa6.99□□□□□ -1.29
SMARCC1-205ENST00000483847 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 PGPEP1LA6NFU8 196 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 CIDEAO60543 219 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 MGST1P10620 155 aaKnown RBP6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 INPP1P49441 399 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 NIT1Q86X76 327 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 TMEM252Q8N6L7 170 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 ASB13Q8WXK3 278 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 UBE2WQ96B02 151 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 HYLS1Q96M11 299 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 LYRM2Q9NU23 88 aaPredicted RBP6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 C11orf21Q9P2W6 132 aa6.98□□□□□ -1.29
SMARCC1-205ENST00000483847 FAM25EA8MYX2 175 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 OR7C2O60412 319 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 TMBIM6P55061 237 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 ATRAIDQ6UW56 229 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 CYB561D1Q8N8Q1 229 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 THAP6Q8TBB0 222 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 TMED6Q8WW62 240 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 KCNS1Q96KK3 526 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 ATP5SQ99766 215 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 SAMD10Q9BYL1 202 aa6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 MRPS26Q9BYN8 205 aaKnown RBP6.97□□□□□ -1.29
SMARCC1-205ENST00000483847 H3BMQ9 156 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 BTCP35070 178 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 UBE2L3P68036 154 aaKnown RBP6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 HBG1P69891 147 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 HBG2P69892 147 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 SPANXN2Q5MJ10 180 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 STX12Q86Y82 276 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 OR2T35Q8NGX2 323 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 C9orf85Q96MD7 179 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 BCL7BQ9BQE9 202 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 TREM1Q9NP99 234 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.3
SMARCC1-205ENST00000483847 A0A087WWC5 75 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 GAS8-AS1O95177 125 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 ZNF80P51504 273 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 S100A10P60903 97 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 ATP6V1FQ16864 119 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 TMEM75Q8N9X5 138 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 C2orf50Q96LR7 162 aa6.95□□□□□ -1.3
SMARCC1-205ENST00000483847 SH3BGRL3Q9H299 93 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms