RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 A0A087WWC5 75 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 ANKRD20A5PA0PJZ0 165 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 FNDC10F2Z333 226 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 L7N2F9 121 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 CTDSP2O14595 271 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 PHOX2AO14813 284 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 SFT2D2O95562 160 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 NBEAP1P0C6P0 100 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 VAMP2P63027 116 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 ARL16Q0P5N6 197 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 ZNF266Q14584 549 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 C4orf46Q504U0 113 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 CFAP126Q5VTH2 177 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 DGAT2L7PQ6IED9 249 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 CYB561D1Q8N8Q1 229 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 C7orf33Q8WU49 177 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 SMIM4Q8WVI0 70 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 DIRAS2Q96HU8 199 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 HYLS1Q96M11 299 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
USP54-213ENST00000481991 CIDEAO60543 219 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 CRPP02741 224 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 PRSS1P07477 247 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
USP54-213ENST00000481991 INPP1P49441 399 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 CAV2P51636 162 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 RANP62826 216 aaKnown RBP4.9□□□□□ -1.63
USP54-213ENST00000481991 BAXQ07812 192 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 Q0VG73 95 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 PPP1R1AQ13522 171 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 TMEM14EPQ6UXP3 125 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 NIT1Q86X76 327 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 C9orf163Q8N9P6 203 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 DYNC2LI1Q8TCX1 351 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 SAMD10Q9BYL1 202 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 NMES1Q9C002 83 aa4.9□□□□□ -1.63
USP54-213ENST00000481991 A0A087WXM4 84 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 A0A087WYN8 130 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 A0A0J9YXV3 536 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 DIRC3C9JPN6 131 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 TYMSP04818 313 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 FAUP35544 74 aaKnown RBP4.89□□□□□ -1.63
USP54-213ENST00000481991 PDE6HQ13956 83 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 LGALSLQ3ZCW2 172 aaPredicted RBP4.89□□□□□ -1.63
USP54-213ENST00000481991 Q6AWC8 147 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 WDR73Q6P4I2 378 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 REG3GQ6UW15 175 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 SDIM1Q6ZPB5 146 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 C15orf54Q8N8G6 183 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 LYPD6BQ8NI32 183 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 ASB13Q8WXK3 278 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 GGACTQ9BVM4 153 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 MIXL1Q9H2W2 232 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 TMEM14CQ9P0S9 112 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 RABL2AQ9UBK7 228 aaPredicted RBP4.89□□□□□ -1.63
USP54-213ENST00000481991 KIF25-AS1Q9Y6Z4 181 aa4.89□□□□□ -1.63
USP54-213ENST00000481991 TRAV21A0A0B4J279 112 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 PGPEP1LA6NFU8 196 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 F6UZH7 168 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 TAAR5O14804 337 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 CST7O76096 145 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 ANGP03950 147 aaKnown RBP4.88□□□□□ -1.63
USP54-213ENST00000481991 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 FGF8P55075 233 aaPredicted RBP4.88□□□□□ -1.63
USP54-213ENST00000481991 KRTAP10-8P60410 259 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 IAH1Q2TAA2 248 aaPredicted RBP4.88□□□□□ -1.63
USP54-213ENST00000481991 KCNS1Q96KK3 526 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 TNXBP22105 4242 aa4.88□□□□□ -1.63
USP54-213ENST00000481991 TRBV7-9A0A0J9YWB2 115 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 UBE2L5PA0A1B0GUS4 154 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 CTDSPLO15194 276 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 FGF7P21781 194 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 RPL29P47914 159 aaKnown RBP4.87□□□□□ -1.63
USP54-213ENST00000481991 TAS2R30P59541 319 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 RPL19P84098 196 aaKnown RBP4.87□□□□□ -1.63
USP54-213ENST00000481991 GCSAMLQ5JQS6 135 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 ENHOQ6UWT2 76 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 MIR17HGQ75NE6 70 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 OR10G9Q8NGN4 311 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 OR2G3Q8NGZ4 309 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 CMTM2Q8TAZ6 248 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 BCL7BQ9BQE9 202 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 SLC25A2Q9BXI2 301 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 NAA50Q9GZZ1 169 aaKnown RBP4.87□□□□□ -1.63
USP54-213ENST00000481991 TREM1Q9NP99 234 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 UQCC1Q9NVA1 299 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 Q9UF83 564 aa4.87□□□□□ -1.63
USP54-213ENST00000481991 RSL24D1Q9UHA3 163 aaKnown RBP4.87□□□□□ -1.63
USP54-213ENST00000481991 LSM5Q9Y4Y9 91 aaKnown RBP4.87□□□□□ -1.63
USP54-213ENST00000481991 IGHV3-64A0A075B6Q5 118 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 C9orf170A2RU37 121 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 C7orf66A4D0T2 115 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 RBAKDNA6NC62 111 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 FAM24AA6NFZ4 105 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 OR7C2O60412 319 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 TOMM5Q8N4H5 51 aa4.86□□□□□ -1.63
USP54-213ENST00000481991 C14orf178Q8N769 122 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms