RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TIMM9Q9Y5J7 89 aa8.79□□□□□ -1
HPS4-212ENST00000481910 IGHV7-4-1A0A0J9YVY3 117 aa8.78□□□□□ -1
HPS4-212ENST00000481910 COX7A2P2O60397 106 aa8.78□□□□□ -1
HPS4-212ENST00000481910 CSN3P07498 182 aa8.78□□□□□ -1
HPS4-212ENST00000481910 SPINK8P0C7L1 97 aa8.78□□□□□ -1
HPS4-212ENST00000481910 SEC11BP0C7V7 166 aa8.78□□□□□ -1
HPS4-212ENST00000481910 CRYBB3P26998 211 aa8.78□□□□□ -1
HPS4-212ENST00000481910 FFAR4Q5NUL3 377 aa8.78□□□□□ -1
HPS4-212ENST00000481910 ST20Q9HBF5 79 aa8.78□□□□□ -1
HPS4-212ENST00000481910 HIGD1AQ9Y241 93 aa8.78□□□□□ -1
HPS4-212ENST00000481910 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
HPS4-212ENST00000481910 APOHP02749 345 aaPredicted RBP8.78□□□□□ -1
HPS4-212ENST00000481910 SERF2P84101 59 aa8.78□□□□□ -1
HPS4-212ENST00000481910 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
HPS4-212ENST00000481910 PATE2Q6UY27 113 aa8.78□□□□□ -1
HPS4-212ENST00000481910 OR1L4Q8NGR5 311 aa8.78□□□□□ -1
HPS4-212ENST00000481910 TMEM37Q8WXS4 190 aa8.78□□□□□ -1
HPS4-212ENST00000481910 C16orf92Q96LL3 132 aa8.78□□□□□ -1
HPS4-212ENST00000481910 RHPN1-AS1Q9BWJ2 59 aa8.78□□□□□ -1
HPS4-212ENST00000481910 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
HPS4-212ENST00000481910 A0A1W2PS18 150 aa8.77□□□□□ -1.01
HPS4-212ENST00000481910 TIRAPP58753 221 aa8.77□□□□□ -1.01
HPS4-212ENST00000481910 PRR31Q5SQ13 230 aa8.77□□□□□ -1.01
HPS4-212ENST00000481910 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
HPS4-212ENST00000481910 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1.01
HPS4-212ENST00000481910 CHEK1O14757 476 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 EIF4EBP3O60516 100 aaPredicted RBP8.76□□□□□ -1.01
HPS4-212ENST00000481910 PFN1P07737 140 aaKnown RBP8.76□□□□□ -1.01
HPS4-212ENST00000481910 IGLL1P15814 213 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 Q6ZWC4 215 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 LINC00305Q7Z4B0 112 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 OR2K2Q8NGT1 345 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 DYNLRB2Q8TF09 96 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 GATAD1Q8WUU5 269 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
HPS4-212ENST00000481910 CDIP1Q9H305 208 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 SIGLEC8Q9NYZ4 499 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 SELENOKQ9Y6D0 94 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 U3KQE9 123 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 NOTCH3Q9UM47 2321 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 TRAV8-6A0A0B4J262 113 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 C9orf118A6NHY6 69 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 H3BRM9 83 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 BUB3O43684 328 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 SRIP30626 198 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 C9orf66Q5T8R8 295 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 PARLQ9H300 379 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 VSIRQ9H7M9 311 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
HPS4-212ENST00000481910 DIRC3C9JPN6 131 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 F8W1H4 67 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 J3KT08 172 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 INSL3P51460 131 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 OR10G7Q8NGN6 311 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 SGK494Q96LW2 274 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
HPS4-212ENST00000481910 TEX48A0A1B0GUV7 120 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 RBFOX3A6NFN3 312 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 H3BRN7 92 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
HPS4-212ENST00000481910 DEFB114Q30KQ6 69 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 TECRQ9NZ01 308 aaKnown RBP8.74□□□□□ -1.01
HPS4-212ENST00000481910 CRYGDP07320 174 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
HPS4-212ENST00000481910 MORN5Q5VZ52 161 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 SYT8Q8NBV8 401 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
HPS4-212ENST00000481910 VWFP04275 2813 aa8.73□□□□□ -1.01
HPS4-212ENST00000481910 IGLV1-51P01701 117 aa8.73□□□□□ -1.01
HPS4-212ENST00000481910 PMVKQ15126 192 aa8.73□□□□□ -1.01
HPS4-212ENST00000481910 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
HPS4-212ENST00000481910 RPRMQ9NS64 109 aa8.73□□□□□ -1.01
HPS4-212ENST00000481910 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
HPS4-212ENST00000481910 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
HPS4-212ENST00000481910 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 IGKV3-7A0A075B6H7 116 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 TRAV9-2A0A087WT02 112 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 ZNF253O75346 499 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 BPIFA4PQ86YQ2 179 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
HPS4-212ENST00000481910 RPL7P18124 248 aaKnown RBP8.71□□□□□ -1.02
HPS4-212ENST00000481910 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.02
HPS4-212ENST00000481910 Q8N976 141 aa8.71□□□□□ -1.02
HPS4-212ENST00000481910 SPANXDQ9BXN6 97 aa8.71□□□□□ -1.02
HPS4-212ENST00000481910 C7orf71A4D174 169 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 IZUMO1RA6ND01 250 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 ZNF785A8K8V0 405 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 J3QL48 77 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 HSBP1O75506 76 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 NHLRC4P0CG21 123 aaPredicted RBP8.7□□□□□ -1.02
HPS4-212ENST00000481910 GALR1P47211 349 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 TAS2R45P59539 299 aa8.7□□□□□ -1.02
HPS4-212ENST00000481910 ZNF506Q5JVG8 444 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms