RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 EMP1P54849 157 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 DAZ2Q13117 558 aaKnown RBP8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 OCC1Q8TAD7 63 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 SMIM7Q9BQ49 75 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 BIN3Q9NQY0 253 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 DKK2Q9UBU2 259 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 NAGKQ9UJ70 344 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 TIMM8BQ9Y5J9 83 aaPredicted RBP8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 LY96Q9Y6Y9 160 aa8.85□□□□□ -0.99
SHROOM3-205ENST00000481002 TRGV11A0A075B6L2 103 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 CXorf65A6NEN9 183 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 LYRM9A8MSI8 78 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 SNURFLB1AK76 121 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 TYMSP04818 313 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 SPART-AS1P0CW21 52 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 TCL1AP56279 114 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 FAM74A3Q4VXF1 159 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 FAM222AQ5U5X8 452 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 C11orf45Q8TAV5 145 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 MDFICQ9P1T7 246 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
SHROOM3-205ENST00000481002 MUC4Q99102 2169 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 IGHV3-16A0A0C4DH30 117 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 LINC00862A6NCI5 91 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 ZNF727A8MUV8 499 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 KRBOX1C9JBD0 128 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 ORM1P02763 201 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
SHROOM3-205ENST00000481002 ZNF415Q09FC8 603 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 LINC01559Q495D7 138 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 DNLZQ5SXM8 178 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 PRR27Q6MZM9 219 aa8.83□□□□□ -1
SHROOM3-205ENST00000481002 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
SHROOM3-205ENST00000481002 B4DEV8 164 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 K7EN84 100 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 OR5I1Q13606 314 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 C12orf74Q32Q52 190 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 LINC00612Q8N6U2 182 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 SPXQ9BT56 116 aa8.82□□□□□ -1
SHROOM3-205ENST00000481002 M0R036 132 aa8.81□□□□□ -1
SHROOM3-205ENST00000481002 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
SHROOM3-205ENST00000481002 TMEM241Q24JQ0 296 aa8.81□□□□□ -1
SHROOM3-205ENST00000481002 UQCC3Q6UW78 93 aa8.81□□□□□ -1
SHROOM3-205ENST00000481002 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
SHROOM3-205ENST00000481002 C9orf85Q96MD7 179 aa8.81□□□□□ -1
SHROOM3-205ENST00000481002 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 SPINK4O60575 86 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 CXCL1P09341 107 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 RNASE3P12724 160 aaKnown RBP8.8□□□□□ -1
SHROOM3-205ENST00000481002 LGALS9BQ3B8N2 356 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 LINC01551Q86U37 167 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 NUDT10Q8NFP7 164 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 MUC7Q8TAX7 377 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 NUDT11Q96G61 164 aa8.8□□□□□ -1
SHROOM3-205ENST00000481002 M0R2P5 195 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 P01737 135 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 SFTA3P0C7M3 94 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 ASIPP42127 132 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 DAD1P61803 113 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 RPL19P84098 196 aaKnown RBP8.79□□□□□ -1
SHROOM3-205ENST00000481002 Q6ZTI0 123 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 RASL10AQ92737 203 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 PTH2Q96A98 100 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 IL36BQ9NZH7 164 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 NAT8Q9UHE5 227 aa8.79□□□□□ -1
SHROOM3-205ENST00000481002 NACAE9PAV3 2078 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 TMSB15BA0A087X1C1 80 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 GRIFINA4D1Z8 144 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 DEFB130BP0DP73 79 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 DEFB130AP0DP74 79 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 S100A4P26447 101 aaKnown RBP8.78□□□□□ -1
SHROOM3-205ENST00000481002 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
SHROOM3-205ENST00000481002 RPL23P62829 140 aaKnown RBP8.78□□□□□ -1
SHROOM3-205ENST00000481002 Q6ZTC4 211 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 COMMD7Q86VX2 200 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 C18orf15Q96N68 181 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
SHROOM3-205ENST00000481002 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
SHROOM3-205ENST00000481002 TRGV1A0A0A0MS02 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 GAGE12BA1L429 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 GAGE7O76087 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 ARMS2P0C7Q2 107 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 GAGE12FP0CL80 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 GAGE12GP0CL81 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 GAGE12IP0CL82 117 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 MED14OSP0DP75 135 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 OR2D3Q8NGH3 330 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 PHLDA1Q8WV24 401 aaPredicted RBP8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
SHROOM3-205ENST00000481002 OSTCQ9NRP0 149 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms