RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CLLU1Q5K131 121 aa8.73□□□□□ -1.01
TRA2B-212ENST00000480461 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
TRA2B-212ENST00000480461 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
TRA2B-212ENST00000480461 NDFIP1Q9BT67 221 aa8.73□□□□□ -1.01
TRA2B-212ENST00000480461 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
TRA2B-212ENST00000480461 MDFICQ9P1T7 246 aa8.73□□□□□ -1.01
TRA2B-212ENST00000480461 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 IGKV3D-20A0A0C4DH25 116 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 ZNF674Q2M3X9 581 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 EIF4E3Q8N5X7 224 aaKnown RBP8.72□□□□□ -1.01
TRA2B-212ENST00000480461 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 RYR1P21817 5038 aa8.72□□□□□ -1.01
TRA2B-212ENST00000480461 FABP5P3A8MUU1 101 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 TMEM250H0YL14 139 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 RGS13O14921 159 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.02
TRA2B-212ENST00000480461 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
TRA2B-212ENST00000480461 C12orf74Q32Q52 190 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 CENPWQ5EE01 88 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 DKK2Q9UBU2 259 aa8.71□□□□□ -1.02
TRA2B-212ENST00000480461 CBY3A6NI87 242 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 SH2D1AO60880 128 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 ZNF493Q6ZR52 646 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 OCC1Q8TAD7 63 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
TRA2B-212ENST00000480461 PARLQ9H300 379 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 NAGKQ9UJ70 344 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 KMT2AQ03164 3969 aa8.7□□□□□ -1.02
TRA2B-212ENST00000480461 IGHV3-16A0A0C4DH30 117 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 TMEM189A5PLL7 270 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 K7EN84 100 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 NDUFS6O75380 124 aaKnown RBP8.69□□□□□ -1.02
TRA2B-212ENST00000480461 TYMSP04818 313 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 RAB14P61106 215 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
TRA2B-212ENST00000480461 NOP10Q9NPE3 64 aaKnown RBP8.69□□□□□ -1.02
TRA2B-212ENST00000480461 CXorf65A6NEN9 183 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 KRBOX1C9JBD0 128 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 SPART-AS1P0CW21 52 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 GNG4P50150 75 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 CEBPGP53567 150 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 DAZ2Q13117 558 aaKnown RBP8.68□□□□□ -1.02
TRA2B-212ENST00000480461 OR5I1Q13606 314 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
TRA2B-212ENST00000480461 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
TRA2B-212ENST00000480461 C19orf71A6NCJ1 209 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 C9JCJ5 164 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 M0R036 132 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 ORM1P02763 201 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
TRA2B-212ENST00000480461 TCL1AP56279 114 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 RPL19P84098 196 aaKnown RBP8.67□□□□□ -1.02
TRA2B-212ENST00000480461 PEA15Q15121 130 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
TRA2B-212ENST00000480461 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 LINC00476Q8WZB0 136 aa8.67□□□□□ -1.02
TRA2B-212ENST00000480461 GRIFINA4D1Z8 144 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 SPINK4O60575 86 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 MGST1P10620 155 aaKnown RBP8.66□□□□□ -1.02
TRA2B-212ENST00000480461 Q6ZTC4 211 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 Q6ZTI0 123 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 SMDT1Q9H4I9 107 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 SDF2L1Q9HCN8 221 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
TRA2B-212ENST00000480461 TMSB15BA0A087X1C1 80 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 LYRM9A8MSI8 78 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 B4DEV8 164 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 KCNS1Q96KK3 526 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 C9orf85Q96MD7 179 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
TRA2B-212ENST00000480461 TRGV11A0A075B6L2 103 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 GAGE12BA1L429 117 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 GAGE7O76087 117 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 GAGE12FP0CL80 117 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 GAGE12GP0CL81 117 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 GAGE12IP0CL82 117 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 DNLZQ5SXM8 178 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 NUDT10Q8NFP7 164 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 PHLDA1Q8WV24 401 aaPredicted RBP8.64□□□□□ -1.03
TRA2B-212ENST00000480461 NUDT11Q96G61 164 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
TRA2B-212ENST00000480461 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
TRA2B-212ENST00000480461 ZNF415Q09FC8 603 aa8.63□□□□□ -1.03
TRA2B-212ENST00000480461 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
TRA2B-212ENST00000480461 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
TRA2B-212ENST00000480461 RNASE7Q9H1E1 156 aaKnown RBP8.63□□□□□ -1.03
TRA2B-212ENST00000480461 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
TRA2B-212ENST00000480461 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms