RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
PTCD3-213ENST00000480102 DEFB131BA0A096LNP1 70 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 PRAC2D3DTV9 90 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 K7EP13 123 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 K7EQM0 130 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 M0R2Z0 102 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 M0R3E3 92 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 OR10J4P0C629 311 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 P0DMU3 169 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 FAM231AP0DMU4 169 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 FAM231CP0DMU5 169 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 PYYP10082 97 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 TAGLN2P37802 199 aaKnown RBP3.46□□□□□ -1.86
PTCD3-213ENST00000480102 TCL1AP56279 114 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 SAPCD1Q5SSQ6 148 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 WDR73Q6P4I2 378 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 Q6ZTC4 211 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 IQCF2Q8IXL9 164 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 EIF4E3Q8N5X7 224 aaKnown RBP3.46□□□□□ -1.86
PTCD3-213ENST00000480102 MBD3L1Q8WWY6 194 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 PHYHIPLQ96FC7 376 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 KCNS1Q96KK3 526 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 HYLS1Q96M11 299 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 SPXQ9BT56 116 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 TMEM208Q9BTX3 173 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 Q9H3A6 140 aa3.46□□□□□ -1.86
PTCD3-213ENST00000480102 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 DNAH17Q9UFH2 4485 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 FXYD6-FXYD2A0A087WZ82 144 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 TRAV21A0A0B4J279 112 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 BCL2L11O43521 198 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 C1QBP02746 253 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 TCRAP04437 139 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 ATP5G1P05496 136 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 IGKV2-30P06310 120 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 S100A9P06702 114 aaKnown RBP3.45□□□□□ -1.86
PTCD3-213ENST00000480102 GPX1P07203 203 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 GCHFRP30047 84 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 ATP5G3P48201 142 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 NANOS2P60321 138 aaKnown RBP3.45□□□□□ -1.86
PTCD3-213ENST00000480102 RAB2AP61019 212 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 RANP62826 216 aaKnown RBP3.45□□□□□ -1.86
PTCD3-213ENST00000480102 DNLZQ5SXM8 178 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 FAM222AQ5U5X8 452 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 RPL7L1Q6DKI1 246 aaKnown RBP3.45□□□□□ -1.86
PTCD3-213ENST00000480102 BAP18Q8IXM2 172 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 CYB561D1Q8N8Q1 229 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 TMEM75Q8N9X5 138 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 C11orf72Q8NBR9 251 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 PRSS3P2Q8NHM4 247 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 CMTM2Q8TAZ6 248 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 RASL10AQ92737 203 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 SMIM12Q96EX1 92 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 LINC01587Q99440 93 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 LYSTQ99698 3801 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 ATG101Q9BSB4 218 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 SMIM3Q9BZL3 60 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 EPDR1Q9UM22 224 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 ZFP30Q9Y2G7 519 aa3.45□□□□□ -1.86
PTCD3-213ENST00000480102 DNAH6Q9C0G6 4158 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 DNAH11Q96DT5 4516 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 IGHV4-4A0A075B6R2 117 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 IGHV1OR15-1A0A075B7D0 117 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 PGPA6NDG6 321 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 SNURFLB1AK76 121 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 F6UZH7 168 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 HMGB3O15347 200 aaKnown RBP3.44□□□□□ -1.86
PTCD3-213ENST00000480102 ARPC5O15511 151 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 SPINK4O60575 86 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 IGKV3-20P01619 116 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 IGLV2-11P01706 119 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 CXCL1P09341 107 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 ARL14EPLP0DKL9 152 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 TPT1P13693 172 aaKnown RBP3.44□□□□□ -1.86
PTCD3-213ENST00000480102 DEFB1P60022 68 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 DAD1P61803 113 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 AKR1C8PQ5T2L2 129 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 ZFAND6Q6FIF0 208 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 EXOC3-AS1Q8N2X6 119 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 POM121L12Q8N7R1 296 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 OR11H4Q8NGC9 324 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 BLNKQ8WV28 456 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 VGLL1Q99990 258 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 NDFIP1Q9BT67 221 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 UPK3BQ9BT76 320 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 CELA1Q9UNI1 258 aa3.44□□□□□ -1.86
PTCD3-213ENST00000480102 TRAV12-2A0A075B6T6 113 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 IGKV2-40A0A087WW87 121 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-213ENST00000480102 A0A1W2PPQ1 181 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 KANTRA0A1W2PQU2 76 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 FAM74A7A6NL05 159 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 GGTLC3B5MD39 225 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 TEX46H3BTG2 121 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 IGKV2D-40P01614 121 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-213ENST00000480102 PFN1P07737 140 aaKnown RBP3.43□□□□□ -1.86
PTCD3-213ENST00000480102 AZU1P20160 251 aa3.43□□□□□ -1.86
PTCD3-213ENST00000480102 FLI1Q01543 452 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms