RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
ACTB-210ENST00000477812 ZNF575Q86XF7 245 aa14.28□□□□□ -0.12
ACTB-210ENST00000477812 IL17DQ8TAD2 202 aa14.28□□□□□ -0.12
ACTB-210ENST00000477812 OCC1Q8TAD7 63 aa14.28□□□□□ -0.12
ACTB-210ENST00000477812 ZNF727A8MUV8 499 aa14.27□□□□□ -0.13
ACTB-210ENST00000477812 IBA57Q5T440 356 aaKnown RBP14.27□□□□□ -0.13
ACTB-210ENST00000477812 CELA1Q9UNI1 258 aa14.27□□□□□ -0.13
ACTB-210ENST00000477812 LY96Q9Y6Y9 160 aa14.27□□□□□ -0.13
ACTB-210ENST00000477812 C19orf71A6NCJ1 209 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 TYMSP04818 313 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 EMP1P54849 157 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 LINC01559Q495D7 138 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 FAM74A3Q4VXF1 159 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 KCNS1Q96KK3 526 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 SDF2L1Q9HCN8 221 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 GSN-AS1Q9NRJ2 163 aa14.26□□□□□ -0.13
ACTB-210ENST00000477812 IGHV3-16A0A0C4DH30 117 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 KRBOX1C9JBD0 128 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 GNRH2O43555 120 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 MGST1P10620 155 aaKnown RBP14.25□□□□□ -0.13
ACTB-210ENST00000477812 TCL1AP56279 114 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 UQCC3Q6UW78 93 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 COMMD7Q86VX2 200 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 MDFICQ9P1T7 246 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 DKK2Q9UBU2 259 aa14.25□□□□□ -0.13
ACTB-210ENST00000477812 TRGV11A0A075B6L2 103 aa14.24□□□□□ -0.13
ACTB-210ENST00000477812 OR5I1Q13606 314 aa14.24□□□□□ -0.13
ACTB-210ENST00000477812 FAM222AQ5U5X8 452 aa14.24□□□□□ -0.13
ACTB-210ENST00000477812 LINC01551Q86U37 167 aa14.24□□□□□ -0.13
ACTB-210ENST00000477812 M0R036 132 aa14.23□□□□□ -0.13
ACTB-210ENST00000477812 ORM1P02763 201 aa14.23□□□□□ -0.13
ACTB-210ENST00000477812 SFTA3P0C7M3 94 aa14.23□□□□□ -0.13
ACTB-210ENST00000477812 DAZ2Q13117 558 aaKnown RBP14.23□□□□□ -0.13
ACTB-210ENST00000477812 SOHLH1Q5JUK2 328 aa14.23□□□□□ -0.13
ACTB-210ENST00000477812 TIMM8BQ9Y5J9 83 aaPredicted RBP14.23□□□□□ -0.13
ACTB-210ENST00000477812 B4DEV8 164 aa14.22□□□□□ -0.13
ACTB-210ENST00000477812 ZNF415Q09FC8 603 aa14.22□□□□□ -0.13
ACTB-210ENST00000477812 LINC00612Q8N6U2 182 aa14.22□□□□□ -0.13
ACTB-210ENST00000477812 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
ACTB-210ENST00000477812 BIN3Q9NQY0 253 aa14.22□□□□□ -0.13
ACTB-210ENST00000477812 DNAH7Q8WXX0 4024 aa14.21□□□□□ -0.13
ACTB-210ENST00000477812 LYRM9A8MSI8 78 aa14.21□□□□□ -0.13
ACTB-210ENST00000477812 SPART-AS1P0CW21 52 aa14.21□□□□□ -0.13
ACTB-210ENST00000477812 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
ACTB-210ENST00000477812 RPL19P84098 196 aaKnown RBP14.21□□□□□ -0.13
ACTB-210ENST00000477812 TMEM241Q24JQ0 296 aa14.21□□□□□ -0.13
ACTB-210ENST00000477812 DNLZQ5SXM8 178 aa14.21□□□□□ -0.13
ACTB-210ENST00000477812 SNURFLB1AK76 121 aa14.2□□□□□ -0.14
ACTB-210ENST00000477812 C11orf45Q8TAV5 145 aa14.2□□□□□ -0.14
ACTB-210ENST00000477812 C9orf85Q96MD7 179 aa14.2□□□□□ -0.14
ACTB-210ENST00000477812 NAT8Q9UHE5 227 aa14.2□□□□□ -0.14
ACTB-210ENST00000477812 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 TEX48A0A1B0GUV7 120 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 CXCL1P09341 107 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 RPL23P62829 140 aaKnown RBP14.19□□□□□ -0.14
ACTB-210ENST00000477812 C12orf74Q32Q52 190 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 NUDT10Q8NFP7 164 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 NUDT11Q96G61 164 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 WWC2-AS2Q96NR7 200 aa14.19□□□□□ -0.14
ACTB-210ENST00000477812 RNASE7Q9H1E1 156 aaKnown RBP14.19□□□□□ -0.14
ACTB-210ENST00000477812 CXorf65A6NEN9 183 aa14.18□□□□□ -0.14
ACTB-210ENST00000477812 SPINK4O60575 86 aa14.18□□□□□ -0.14
ACTB-210ENST00000477812 ADCYAP1P18509 176 aa14.18□□□□□ -0.14
ACTB-210ENST00000477812 NANOS2P60321 138 aaKnown RBP14.18□□□□□ -0.14
ACTB-210ENST00000477812 NDUFA5Q16718 116 aa14.18□□□□□ -0.14
ACTB-210ENST00000477812 FAM231DQ6ZW35 169 aa14.18□□□□□ -0.14
ACTB-210ENST00000477812 TMEM218A2RU14 115 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 GRIFINA4D1Z8 144 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 P01737 135 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 ASIPP42127 132 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 Q6ZTI0 123 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 OR2D3Q8NGH3 330 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 ISOC2Q96AB3 205 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 DAZAP1Q96EP5 407 aaKnown RBP14.17□□□□□ -0.14
ACTB-210ENST00000477812 SPXQ9BT56 116 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 SCRT2Q9NQ03 307 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 IL36BQ9NZH7 164 aa14.17□□□□□ -0.14
ACTB-210ENST00000477812 LGALS9BQ3B8N2 356 aa14.16□□□□□ -0.14
ACTB-210ENST00000477812 MUC4Q99102 2169 aa14.15□□□□□ -0.14
ACTB-210ENST00000477812 H3BVH4 76 aa14.15□□□□□ -0.14
ACTB-210ENST00000477812 Q6ZTC4 211 aa14.15□□□□□ -0.14
ACTB-210ENST00000477812 RPP21Q9H633 154 aaKnown RBP14.15□□□□□ -0.14
ACTB-210ENST00000477812 MRPL16Q9NX20 251 aaKnown RBP14.15□□□□□ -0.14
ACTB-210ENST00000477812 M0R2P5 195 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 MED14OSP0DP75 135 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 ADIRFQ15847 76 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 RASL10AQ92737 203 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 PTH2Q96A98 100 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 C18orf15Q96N68 181 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 OSTCQ9NRP0 149 aa14.14□□□□□ -0.15
ACTB-210ENST00000477812 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 GAGE12BA1L429 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 GAGE7O76087 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 ARMS2P0C7Q2 107 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 IGLC6P0CF74 106 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 GAGE12FP0CL80 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 GAGE12GP0CL81 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 GAGE12IP0CL82 117 aa14.13□□□□□ -0.15
ACTB-210ENST00000477812 DEFB130BP0DP73 79 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms