RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	NCOA6	Q14686	2063 aa	Predicted RBP	3.66	□□□□□ -1.82
PTCD3-212	ENST00000477520	PRRC2C	Q9Y520	2896 aa	Known RBP	3.65	□□□□□ -1.82
PTCD3-212	ENST00000477520	NBAS	A2RRP1	2371 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGKV3D-15	A0A087WSY6	115 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRBV30	A0A0K0K1B3	111 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	CYSRT1	A8MQ03	144 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520		B9A039	149 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	C16orf97	H3BN30	126 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	OVOL1	O14753	267 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	TCL1B	O95988	128 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	PPP1R17	O96001	155 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	ARMS2	P0C7Q2	107 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGLC6	P0CF74	106 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	RNASE2	P10153	161 aa	Known RBP	3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	CNTFR	P26992	372 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	LEP	P41159	167 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520		Q0VFX4	171 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	PDE6H	Q13956	83 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	LAGE3	Q14657	143 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	MRPL51	Q4U2R6	128 aa	Known RBP	3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	ORMDL2	Q53FV1	153 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	LINC00305	Q7Z4B0	112 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	GTSCR1	Q86UQ5	136 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	C11orf53	Q8IXP5	236 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	FDCSP	Q8NFU4	85 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	KIR2DL5B	Q8NHK3	375 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	FOXC2	Q99958	501 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	FGF23	Q9GZV9	251 aa	Predicted RBP	3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520		Q9H3A6	140 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	DYNLRB1	Q9NP97	96 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	PRO0628	Q9UI54	55 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	SELENOK	Q9Y6D0	94 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	FAM208B	Q5VWN6	2430 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	ARID1A	O14497	2285 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	USP24	Q9UPU5	2620 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	EML6	Q6ZMW3	1958 aa		3.65	□□□□□ -1.83
PTCD3-212	ENST00000477520	ATRX	P46100	2492 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	GTF3C1	Q12789	2109 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZGRF1	Q86YA3	2104 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	EXPH5	Q8NEV8	1989 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRAV8-1	A0A0A6YYK1	113 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRAV17	A0A0B4J275	112 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	TRAV40	A0A0B4J280	105 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	LOC389332	A0A1B0GUA5	103 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520		H3BVH4	76 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	FSTL3	O95633	263 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	RPL7	P18124	248 aa	Known RBP	3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	MAL	P21145	153 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	LINC01620	Q4KN68	170 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	SPINK9	Q5DT21	86 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	PVRIG	Q6DKI7	326 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGFL2	Q6UWQ7	119 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGFL3	Q6UXB1	125 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	SCGB1D4	Q6XE38	83 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	DTX2	Q86UW9	622 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	MAPKAPK5-AS1	Q8N8E1	139 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	FGFBP3	Q8TAT2	258 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	UBALD1	Q8TB05	177 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGFBPL1	Q8WX77	278 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	FAM173A	Q9BQD7	235 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	PRORY	Q9H606	182 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	CALY	Q9NYX4	217 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	GNG12	Q9UBI6	72 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	KLF13	Q9Y2Y9	288 aa	Predicted RBP	3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF407	Q9C0G0	2248 aa		3.64	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZFYVE26	Q68DK2	2539 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGKV1OR2-108	A0A075B7D4	117 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGHV1-69D	A0A0B4J2H0	117 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520		A0A0J9YW62	118 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF815P	A8K554	130 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	IQCF6	A8MYZ5	107 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	MRPL33	O75394	65 aa	Known RBP	3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	TNFRSF6B	O95407	300 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	IGLV2-11	P01706	119 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	CFC1B	P0CG36	223 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	CFC1	P0CG37	223 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	PYY	P10082	97 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	GP9	P14770	177 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	LYZL1	Q6UWQ5	148 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	PATE2	Q6UY27	113 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	SIGLEC15	Q6ZMC9	328 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZFP2	Q6ZN57	461 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	C16orf47	Q6ZP98	133 aa	Predicted RBP	3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	PRNT	Q86SH4	94 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	POM121L12	Q8N7R1	296 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	SLC25A29	Q8N8R3	303 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	RPL36AL	Q969Q0	106 aa	Known RBP	3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	PIMREG	Q9BSJ6	248 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	CXXC4	Q9H2H0	198 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	OBP2B	Q9NPH6	170 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	NDUFA4L2	Q9NRX3	87 aa		3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	MRPL35	Q9NZE8	188 aa	Known RBP	3.63	□□□□□ -1.83
PTCD3-212	ENST00000477520	ESPL1	Q14674	2120 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	MED12L	Q86YW9	2145 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	ZZEF1	O43149	2961 aa		3.62	□□□□□ -1.83
PTCD3-212	ENST00000477520	POLE	Q07864	2286 aa		3.62	□□□□□ -1.83

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