RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 EIF3GO75821 320 aaKnown RBP eCLIP6.34□□□□□ -1.39
COL4A5-204ENST00000477429 NDUFB6O95139 128 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 BTCP35070 178 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 FAUP35544 74 aaKnown RBP6.34□□□□□ -1.39
COL4A5-204ENST00000477429 RPL29P47914 159 aaKnown RBP6.34□□□□□ -1.39
COL4A5-204ENST00000477429 CAV2P51636 162 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 Q6AWC8 147 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 Q6ZRG5 221 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 FXYD5Q96DB9 178 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 TVP23CQ96ET8 276 aa6.34□□□□□ -1.39
COL4A5-204ENST00000477429 A0A087WWL8 130 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 PANO1I0J062 215 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 TNFRSF6BO95407 300 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 NBEAP1P0C6P0 100 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 PDE6HQ13956 83 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 OR1L4Q8NGR5 311 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 PFDN5Q99471 154 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 SPXQ9BT56 116 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 NAGKQ9UJ70 344 aa6.33□□□□□ -1.4
COL4A5-204ENST00000477429 LSM5Q9Y4Y9 91 aaKnown RBP6.33□□□□□ -1.4
COL4A5-204ENST00000477429 TRAV8-6A0A0B4J262 113 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 RNF222A6NCQ9 220 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 H3BMQ9 156 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 M0R2P5 195 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 TYMSP04818 313 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 BAXQ07812 192 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 LAGE3Q14657 143 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 BAK1Q16611 211 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 CFAP126Q5VTH2 177 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 UQCC1Q9NVA1 299 aa6.32□□□□□ -1.4
COL4A5-204ENST00000477429 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 RBFOX3A6NFN3 312 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 F6UZH7 168 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 RS1O15537 224 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 LINC00694P0DN24 101 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 FGF7P21781 194 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 BCAP31P51572 246 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 AP3S2P59780 193 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
COL4A5-204ENST00000477429 RAB32Q13637 225 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 TDRG1Q3Y452 100 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 MZT2BQ6NZ67 158 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 MITD1Q8WV92 249 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 SDHCQ99643 169 aaPredicted RBP6.31□□□□□ -1.4
COL4A5-204ENST00000477429 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 GTSF1LQ9H1H1 148 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
COL4A5-204ENST00000477429 TRBV7-9A0A0J9YWB2 115 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 PFN1P07737 140 aaKnown RBP6.3□□□□□ -1.4
COL4A5-204ENST00000477429 RANP62826 216 aaKnown RBP6.3□□□□□ -1.4
COL4A5-204ENST00000477429 FAM159AQ6UWV7 190 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 SH2D6Q7Z4S9 175 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 C12orf45Q8N5I9 185 aaPredicted RBP6.3□□□□□ -1.4
COL4A5-204ENST00000477429 TMEM252Q8N6L7 170 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 ATP6V0E2Q8NHE4 81 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 THAP6Q8TBB0 222 aa6.3□□□□□ -1.4
COL4A5-204ENST00000477429 MRPS26Q9BYN8 205 aaKnown RBP6.3□□□□□ -1.4
COL4A5-204ENST00000477429 GPN1Q9HCN4 374 aaPredicted RBP6.3□□□□□ -1.4
COL4A5-204ENST00000477429 TRAV8-1A0A0A6YYK1 113 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 RBAKDNA6NC62 111 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 PGPEP1LA6NFU8 196 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 FBLL1A6NHQ2 334 aaKnown RBP6.29□□□□□ -1.4
COL4A5-204ENST00000477429 DIRC3C9JPN6 131 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 L7N2F9 121 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 IGLV2-11P01706 119 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
COL4A5-204ENST00000477429 TMBIM6P55061 237 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 VAMP2P63027 116 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 GAGE1Q13065 139 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 GAGE4Q13068 117 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 GAGE5Q13069 117 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 IL15RAQ13261 267 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 RAB31Q13636 194 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 PAXXQ9BUH6 204 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 SAMD10Q9BYL1 202 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 C20orf85Q9H1P6 137 aa6.29□□□□□ -1.4
COL4A5-204ENST00000477429 TRBV6-4A0A1B0GX49 114 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 C5orf51A6NDU8 294 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 FAM25EA8MYX2 175 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 SULT1A1P50225 295 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 RHOHQ15669 191 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 SGK494Q96LW2 274 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 SEC22CQ9BRL7 303 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 JPT2Q9H910 190 aa6.28□□□□□ -1.4
COL4A5-204ENST00000477429 LYRM2Q9NU23 88 aaPredicted RBP6.28□□□□□ -1.4
COL4A5-204ENST00000477429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.28□□□□□ -1.4
COL4A5-204ENST00000477429 IGKV2D-24A0A075B6R9 120 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 NHLH2Q02577 135 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 ZNF876PQ49A33 203 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 ZNF506Q5JVG8 444 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 NUDT10Q8NFP7 164 aa6.27□□□□□ -1.41
COL4A5-204ENST00000477429 NUDT11Q96G61 164 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms