RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TRAV21A0A0B4J279 112 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 P0DMU3 169 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 FAM231AP0DMU4 169 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 FAM231CP0DMU5 169 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 HTN1P15515 57 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 TCL1AP56279 114 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 UBE2G1P62253 170 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 Q86TA4 180 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 Q8TAT8 98 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 TVP23CQ96ET8 276 aa8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
CLCNKA-205ENST00000477360 RYR2Q92736 4967 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 H3BNG1 76 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 LTAP01374 205 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 PRB4P10163 310 aaPredicted RBP8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 PEA15Q15121 130 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 PRR9Q5T870 116 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 FAM159AQ6UWV7 190 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
CLCNKA-205ENST00000477360 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 J3KRW8 73 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 SPINK4O60575 86 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 LY6G6CO95867 125 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 PRM2P04554 102 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 SRP19P09132 144 aaKnown RBP8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 DEFB130BP0DP73 79 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 DEFB130AP0DP74 79 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 FAM3BP58499 235 aaPredicted RBP8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 RNF212Q495C1 297 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 SPXQ9BT56 116 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 MLST8Q9BVC4 326 aa8.73□□□□□ -1.01
CLCNKA-205ENST00000477360 LINC00862A6NCI5 91 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 C9JCJ5 164 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 RPL35P42766 123 aaKnown RBP8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 ZNF415Q09FC8 603 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 PRNTQ86SH4 94 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 TMEM183AQ8IXX5 376 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 SGK494Q96LW2 274 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 DERL1Q9BUN8 251 aa8.72□□□□□ -1.01
CLCNKA-205ENST00000477360 TRBV20OR9-2A0A075B6H5 130 aa8.71□□□□□ -1.02
CLCNKA-205ENST00000477360 UQCC3Q6UW78 93 aa8.71□□□□□ -1.02
CLCNKA-205ENST00000477360 PARLQ9H300 379 aa8.71□□□□□ -1.02
CLCNKA-205ENST00000477360 GSN-AS1Q9NRJ2 163 aa8.71□□□□□ -1.02
CLCNKA-205ENST00000477360 PFN1P07737 140 aaKnown RBP8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 SRSF3P84103 164 aaKnown RBP8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 SLAQ13239 276 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 RASL10AQ92737 203 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 C8orf49Q96NF6 230 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 LY96Q9Y6Y9 160 aa8.7□□□□□ -1.02
CLCNKA-205ENST00000477360 C9JQL5 133 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 F5H768 121 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 GCGP01275 180 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 IGLV2-8P01709 118 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 ZNF674Q2M3X9 581 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 PIK3CD-AS1Q5SR53 167 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 POM121L12Q8N7R1 296 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 PTH2Q96A98 100 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 SDF2L1Q9HCN8 221 aa8.69□□□□□ -1.02
CLCNKA-205ENST00000477360 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 FABP5P3A8MUU1 101 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 CIDEAO60543 219 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GAGE7O76087 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GAGE12GP0CL81 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GAGE12IP0CL82 117 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 HTN3P15516 51 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 GNG4P50150 75 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 ZNF80P51504 273 aaPredicted RBP8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 Q6ZTI0 123 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 BIN3Q9NQY0 253 aa8.68□□□□□ -1.02
CLCNKA-205ENST00000477360 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
CLCNKA-205ENST00000477360 CRIP1P50238 77 aa8.67□□□□□ -1.02
CLCNKA-205ENST00000477360 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
CLCNKA-205ENST00000477360 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 M0R2P5 195 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 MUC21Q5SSG8 566 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 DNLZQ5SXM8 178 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 FAM162BQ5T6X4 162 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 Q6ZQT7 251 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
CLCNKA-205ENST00000477360 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
CLCNKA-205ENST00000477360 TYMSP04818 313 aa8.65□□□□□ -1.02
CLCNKA-205ENST00000477360 COMMD7Q86VX2 200 aa8.65□□□□□ -1.02
CLCNKA-205ENST00000477360 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
CLCNKA-205ENST00000477360 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms