RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 TRBV6-4A0A1B0GX49 114 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 CCSO14618 274 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 OR10J4P0C629 311 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 MT1HL1P0DM35 61 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 FGF7P21781 194 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 S100A11P31949 105 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 S100A5P33763 92 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 CSN1S1P47710 185 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 RGS21Q2M5E4 152 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 Q8N976 141 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 ATP6V0E2Q8NHE4 81 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 LENEPQ9Y5L5 61 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 PKHD1L1Q86WI1 4243 aa10.74□□□□□ -0.69
APOBEC3F-203ENST00000476513 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
APOBEC3F-203ENST00000476513 RNF222A6NCQ9 220 aa10.73□□□□□ -0.69
APOBEC3F-203ENST00000476513 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
APOBEC3F-203ENST00000476513 DAZAP1Q96EP5 407 aaKnown RBP10.73□□□□□ -0.69
APOBEC3F-203ENST00000476513 PAXXQ9BUH6 204 aa10.73□□□□□ -0.69
APOBEC3F-203ENST00000476513 IGHV3-73A0A0B4J1V6 119 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 IGSF23A1L1A6 192 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 TYMSP04818 313 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 SULT1A1P50225 295 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 TOR2AQ5JU69 321 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 CFAP126Q5VTH2 177 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
APOBEC3F-203ENST00000476513 C5orf51A6NDU8 294 aa10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 NAP1L6A6NFF2 107 aa10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 IGLV2-11P01706 119 aa10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 DPPA3Q6W0C5 159 aa10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 NPCDR1Q9BY65 106 aa10.71□□□□□ -0.69
APOBEC3F-203ENST00000476513 FAM25EA8MYX2 175 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 GGTLC3B5MD39 225 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 CIDEAO60543 219 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 UPK1BO75841 260 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 HBG1P69891 147 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 HBG2P69892 147 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 ZNF876PQ49A33 203 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 TMEM252Q8N6L7 170 aa10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 LYRM2Q9NU23 88 aaPredicted RBP10.7□□□□□ -0.7
APOBEC3F-203ENST00000476513 PVALBP20472 110 aaPredicted RBP10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 IFITM3Q01628 133 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 SPANXN2Q5MJ10 180 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 STX12Q86Y82 276 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 ATP5SQ99766 215 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 CCDC32Q9BV29 185 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
APOBEC3F-203ENST00000476513 TRAV21A0A0B4J279 112 aa10.68□□□□□ -0.7
APOBEC3F-203ENST00000476513 BTCP35070 178 aa10.68□□□□□ -0.7
APOBEC3F-203ENST00000476513 INPP1P49441 399 aa10.68□□□□□ -0.7
APOBEC3F-203ENST00000476513 RMI2Q96E14 147 aa10.68□□□□□ -0.7
APOBEC3F-203ENST00000476513 LRP2P98164 4655 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 IGKV2D-24A0A075B6R9 120 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 F6UZH7 168 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 OR7C2O60412 319 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 PFDN1O60925 122 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 MGST1P10620 155 aaKnown RBP10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 S100A10P60903 97 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 THAP6Q8TBB0 222 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 KCNS1Q96KK3 526 aa10.67□□□□□ -0.7
APOBEC3F-203ENST00000476513 TRAV8-1A0A0A6YYK1 113 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 ASB13Q8WXK3 278 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 C2orf50Q96LR7 162 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 SH3BGRL3Q9H299 93 aa10.66□□□□□ -0.7
APOBEC3F-203ENST00000476513 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
APOBEC3F-203ENST00000476513 UBE2L3P68036 154 aaKnown RBP10.65□□□□□ -0.7
APOBEC3F-203ENST00000476513 TRIQKQ629K1 86 aa10.65□□□□□ -0.7
APOBEC3F-203ENST00000476513 hCG_2014768A0A024R1R8 64 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 PTTG1O95997 202 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 DEFA1P59665 94 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 DEFA3P59666 94 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 GAGE1Q13065 139 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 GAGE4Q13068 117 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 GAGE5Q13069 117 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 RAB32Q13637 225 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 GAGE13Q4V321 117 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 TREM1Q9NP99 234 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
APOBEC3F-203ENST00000476513 PGPEP1LA6NFU8 196 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 IL15RAQ13261 267 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 ZNF506Q5JVG8 444 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 CYB561D1Q8N8Q1 229 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 Q9UF83 564 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 KLK12Q9UKR0 248 aa10.63□□□□□ -0.71
APOBEC3F-203ENST00000476513 A0A087WWC5 75 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 CENPXA8MT69 81 aa10.62□□□□□ -0.71
APOBEC3F-203ENST00000476513 NHLH2Q02577 135 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms