RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 CFAP126Q5VTH2 177 aa11.63□□□□□ -0.55
RNF220-212ENST00000475378 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
RNF220-212ENST00000475378 MIR17HGQ75NE6 70 aa11.63□□□□□ -0.55
RNF220-212ENST00000475378 OR51M1Q9H341 326 aa11.63□□□□□ -0.55
RNF220-212ENST00000475378 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 CIDEAO60543 219 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 OR10J4P0C629 311 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 FGF7P21781 194 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 MITD1Q8WV92 249 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 DNAJC30Q96LL9 226 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 BCL7BQ9BQE9 202 aa11.62□□□□□ -0.55
RNF220-212ENST00000475378 LSM5Q9Y4Y9 91 aaKnown RBP11.62□□□□□ -0.55
RNF220-212ENST00000475378 LINC00694P0DN24 101 aa11.61□□□□□ -0.55
RNF220-212ENST00000475378 S100A11P31949 105 aa11.61□□□□□ -0.55
RNF220-212ENST00000475378 CSN1S1P47710 185 aa11.61□□□□□ -0.55
RNF220-212ENST00000475378 NPCDR1Q9BY65 106 aa11.61□□□□□ -0.55
RNF220-212ENST00000475378 IGHV3-73A0A0B4J1V6 119 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 C5orf51A6NDU8 294 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 CCSO14618 274 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 TMBIM6P55061 237 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 TMED6Q8WW62 240 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 RMI2Q96E14 147 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
RNF220-212ENST00000475378 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
RNF220-212ENST00000475378 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
RNF220-212ENST00000475378 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
RNF220-212ENST00000475378 SULT1A1P50225 295 aa11.59□□□□□ -0.55
RNF220-212ENST00000475378 ZNF876PQ49A33 203 aa11.59□□□□□ -0.55
RNF220-212ENST00000475378 Q6ZRU5 148 aa11.59□□□□□ -0.55
RNF220-212ENST00000475378 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
RNF220-212ENST00000475378 IGKV2D-24A0A075B6R9 120 aa11.58□□□□□ -0.56
RNF220-212ENST00000475378 TRAV8-1A0A0A6YYK1 113 aa11.58□□□□□ -0.56
RNF220-212ENST00000475378 TRAV21A0A0B4J279 112 aa11.58□□□□□ -0.56
RNF220-212ENST00000475378 RANP62826 216 aaKnown RBP11.58□□□□□ -0.56
RNF220-212ENST00000475378 TMEM252Q8N6L7 170 aa11.58□□□□□ -0.56
RNF220-212ENST00000475378 SDF2L1Q9HCN8 221 aa11.58□□□□□ -0.56
RNF220-212ENST00000475378 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 MGST1P10620 155 aaKnown RBP11.57□□□□□ -0.56
RNF220-212ENST00000475378 BTCP35070 178 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 INPP1P49441 399 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 ATP5SQ99766 215 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 SH3BGRL3Q9H299 93 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 RPH3ALQ9UNE2 315 aa11.57□□□□□ -0.56
RNF220-212ENST00000475378 H3BMQ9 156 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 ASIPP42127 132 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 HBG1P69891 147 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 HBG2P69892 147 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 TVP23CQ96ET8 276 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 KCNS1Q96KK3 526 aa11.56□□□□□ -0.56
RNF220-212ENST00000475378 F6UZH7 168 aa11.55□□□□□ -0.56
RNF220-212ENST00000475378 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
RNF220-212ENST00000475378 ASB13Q8WXK3 278 aa11.55□□□□□ -0.56
RNF220-212ENST00000475378 GAGE12JA6NER3 117 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 GAGE1Q13065 139 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 GAGE4Q13068 117 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 GAGE5Q13069 117 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 GAGE13Q4V321 117 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 NIT1Q86X76 327 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 STX12Q86Y82 276 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 Q9UF83 564 aa11.54□□□□□ -0.56
RNF220-212ENST00000475378 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 OR7C2O60412 319 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 PVALBP20472 110 aaPredicted RBP11.53□□□□□ -0.56
RNF220-212ENST00000475378 ZNF506Q5JVG8 444 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 SPANXN2Q5MJ10 180 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 PTH2Q96A98 100 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 KLK12Q9UKR0 248 aa11.53□□□□□ -0.56
RNF220-212ENST00000475378 A0A087WWC5 75 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 FAM25EA8MYX2 175 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 IL15RAQ13261 267 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 THAP6Q8TBB0 222 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.57
RNF220-212ENST00000475378 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
RNF220-212ENST00000475378 UBE2L3P68036 154 aaKnown RBP11.51□□□□□ -0.57
RNF220-212ENST00000475378 UBE2WQ96B02 151 aa11.51□□□□□ -0.57
RNF220-212ENST00000475378 C2orf50Q96LR7 162 aa11.51□□□□□ -0.57
RNF220-212ENST00000475378 TREM1Q9NP99 234 aa11.51□□□□□ -0.57
RNF220-212ENST00000475378 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.51□□□□□ -0.57
RNF220-212ENST00000475378 PANO1I0J062 215 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 S100A10P60903 97 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 LINC00479Q96M42 142 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 SAMD10Q9BYL1 202 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 PARLQ9H300 379 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
RNF220-212ENST00000475378 RAB32Q13637 225 aa11.49□□□□□ -0.57
RNF220-212ENST00000475378 ZFP2Q6ZN57 461 aa11.49□□□□□ -0.57
RNF220-212ENST00000475378 GOLT1AQ6ZVE7 132 aa11.49□□□□□ -0.57
RNF220-212ENST00000475378 OR10G9Q8NGN4 311 aa11.49□□□□□ -0.57
RNF220-212ENST00000475378 OTORQ9NRC9 128 aa11.49□□□□□ -0.57
RNF220-212ENST00000475378 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
RNF220-212ENST00000475378 S100A5P33763 92 aa11.48□□□□□ -0.57
RNF220-212ENST00000475378 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
RNF220-212ENST00000475378 NHLH2Q02577 135 aa11.48□□□□□ -0.57
RNF220-212ENST00000475378 PGPA6NDG6 321 aa11.47□□□□□ -0.57
RNF220-212ENST00000475378 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms