RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 IL7P13232 177 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 EVI2AP22794 236 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 FXYD3Q14802 87 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 CCSMST1Q4G0I0 132 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 LYPD5Q6UWN5 251 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 OR5A2Q8NGI9 324 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 OTOSQ8NHW6 89 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 F8P00451 2351 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 ZFYVE26Q68DK2 2539 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 KIDINS220Q9ULH0 1771 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 F5P12259 2224 aa0.29□□□□□ -2.36
LTN1-204ENST00000475344 PIEZO1Q92508 2521 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 DLEC1Q9Y238 1755 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 IGF2P01344 180 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 TCRAP04437 139 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 CKS2P33552 79 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 ETV6P41212 452 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 IQCJQ1A5X6 159 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 DEFB132Q7Z7B7 95 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 C5orf56Q8N8D9 126 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.28□□□□□ -2.36
LTN1-204ENST00000475344 OR8J3Q8NGG0 315 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 SMIM7Q9BQ49 75 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 C19orf12Q9NSK7 152 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 MRPL35Q9NZE8 188 aaKnown RBP0.28□□□□□ -2.36
LTN1-204ENST00000475344 MYH13Q9UKX3 1938 aa0.28□□□□□ -2.36
LTN1-204ENST00000475344 RBBP6Q7Z6E9 1792 aaKnown RBP0.27□□□□□ -2.37
LTN1-204ENST00000475344 H0YJX3 145 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 UQCRQO14949 82 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 RHOHQ15669 191 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 ASB16-AS1Q495Z4 193 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 Q5XG85 94 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 POLQO75417 2590 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 ABCA12Q86UK0 2595 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 PLXNA2O75051 1894 aa0.27□□□□□ -2.37
LTN1-204ENST00000475344 IGHV1-24A0A0C4DH33 117 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 A0A0G2JMM0 328 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 TSTD3H0UI37 97 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 TPST1O60507 370 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 MT-ND4LP03901 98 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 SDC4P31431 198 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 PCBD1P61457 104 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 B2MP61769 119 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 LSM3P62310 102 aaKnown RBP0.26□□□□□ -2.37
LTN1-204ENST00000475344 RPS28P62857 69 aaKnown RBP0.26□□□□□ -2.37
LTN1-204ENST00000475344 SPINK13Q1W4C9 94 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 IDO2Q6ZQW0 420 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 MED23Q9ULK4 1368 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 WDR97A6NE52 1622 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 LRP5O75197 1615 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 RREB1Q92766 1687 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 CDK5RAP2Q96SN8 1893 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 TANC1Q9C0D5 1861 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 DOCK11Q5JSL3 2073 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
LTN1-204ENST00000475344 OVOS2A0A0G2JMS6 1433 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 GNG14A0A1W2PPG7 69 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 J3KT08 172 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 FXYD1O00168 92 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 NBEAP1P0C6P0 100 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 RPL37P61927 97 aaKnown RBP0.25□□□□□ -2.37
LTN1-204ENST00000475344 TSKUQ8WUA8 353 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 SKA2Q8WVK7 121 aaPredicted RBP0.25□□□□□ -2.37
LTN1-204ENST00000475344 MRPL40Q9NQ50 206 aaKnown RBP0.25□□□□□ -2.37
LTN1-204ENST00000475344 GINS2Q9Y248 185 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
LTN1-204ENST00000475344 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
LTN1-204ENST00000475344 CASZ1Q86V15 1759 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 CPDO75976 1380 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 TFF1P04155 84 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 ADCYAP1P18509 176 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 PSPHP78330 225 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 OR8B8Q15620 311 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 HSD17B12Q53GQ0 312 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 TMEM244Q5VVB8 128 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 OR8I2Q8N0Y5 310 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 DMAC1Q96GE9 116 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 ATG5Q9H1Y0 275 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 MAP2P11137 1827 aaKnown RBP0.24□□□□□ -2.37
LTN1-204ENST00000475344 KIF13AQ9H1H9 1805 aa0.24□□□□□ -2.37
LTN1-204ENST00000475344 CADP27708 2225 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 ZCCHC6Q5VYS8 1495 aaKnown RBP0.23□□□□□ -2.37
LTN1-204ENST00000475344 PTPRGP23470 1445 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 MYH6P13533 1939 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 TRAV36DV7A0A075B6V5 113 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 A0A1B0GW64 132 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 DPM2O94777 84 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 CD3DP04234 171 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 CCKP06307 115 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 PAEPP09466 180 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 OR4S1Q8NGB4 309 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 METTL1Q9UBP6 276 aaKnown RBP0.23□□□□□ -2.37
LTN1-204ENST00000475344 HSPB11Q9Y547 144 aa0.23□□□□□ -2.37
LTN1-204ENST00000475344 ARHGAP31Q2M1Z3 1444 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 DEGS1O15121 323 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 TNFSF15O95150 251 aa0.22□□□□□ -2.37
LTN1-204ENST00000475344 HIST1H1BP16401 226 aaKnown RBP0.22□□□□□ -2.37
LTN1-204ENST00000475344 UNQ5815/PRO19632Q6UWF5 114 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms