RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	C5orf67	F2Z3F1	127 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		H3BQ15	152 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	LY6L	H3BQJ8	138 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		H3BRN7	92 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FXYD1	O00168	92 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PGLYRP1	O75594	196 aa	Predicted RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SIX6	O95475	246 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	CYB5A	P00167	134 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PPY	P01298	95 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV2D-40	P01614	121 aa	Predicted RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKC	P01834	107 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRB4	P10163	310 aa	Predicted RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	DEFA4	P12838	97 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MIF	P14174	115 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	RNASE4	P34096	147 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	ASIP	P42127	132 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SSR2	P43308	183 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	DSCR4	P56555	118 aa	Predicted RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FXYD6P3	P58550	94 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	BTG2	P78543	158 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SSBP1	Q04837	148 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FOXF1	Q12946	379 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PMCHL1	Q16048	86 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGFBP7	Q16270	282 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	NNAT	Q16517	81 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SPATA45	Q537H7	98 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	C10orf128	Q5T292	105 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	KPRP	Q5T749	579 aa	Predicted RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRR9	Q5T870	116 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q6AWC8	147 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FOXI2	Q6ZQN5	318 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q6ZQT0	140 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZNF818P	Q6ZRF7	136 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	C5orf38	Q86SI9	138 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	NDUFA11	Q86Y39	141 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q8IYB0	196 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZNF664	Q8N3J9	261 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	C15orf53	Q8NAA6	179 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MUC7	Q8TAX7	377 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FAM213B	Q8TBF2	198 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	DCANP1	Q8TF63	244 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	RNASE6	Q93091	150 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	DIRC1	Q969H9	104 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	S100A16	Q96FQ6	103 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00526	Q96FQ7	95 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	DMAC1	Q96GE9	116 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	C14orf144	Q96I85	54 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SDF2	Q99470	211 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	NABP2	Q9BQ15	211 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	NAA38	Q9BRA0	125 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	TXNDC17	Q9BRA2	123 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		Q9BRP9	147 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	CYP4F30P	Q9H0H9	118 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	AGPAT4-IT1	Q9H0P7	198 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	LINC00574	Q9H8X3	128 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MANBAL	Q9NQG1	85 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MRPL35	Q9NZE8	188 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	TP73-AS1	Q9UF72	201 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	PSORS1C2	Q9UIG4	136 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	LSM2	Q9Y333	95 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	FAM215A	Q9Y5M1	114 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742		R4GMQ9	66 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	CLIP1	P30622	1438 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	CEP162	Q5TB80	1403 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	VPS8	Q8N3P4	1428 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	RRBP1	Q9P2E9	1410 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	HECW2	Q9P2P5	1572 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	CCDC88A	Q3V6T2	1871 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	NUP210L	Q5VU65	1888 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRPM6	Q9BX84	2022 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	RP1	P56715	2156 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	SIPA1L1	O43166	1804 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	ATAD5	Q96QE3	1844 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	ZFC3H1	O60293	1989 aa	Known RBP	0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	EML6	Q6ZMW3	1958 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	KIAA2026	Q5HYC2	2103 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MED12L	Q86YW9	2145 aa		0.43	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYH7B	A7E2Y1	1941 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TCHH	Q07283	1943 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	GREB1	Q4ZG55	1949 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	MYH13	Q9UKX3	1938 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	KDM6B	O15054	1643 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	AHDC1	Q5TGY3	1603 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DENND4B	O75064	1496 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	DSCAM	O60469	2012 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	HEATR5A	Q86XA9	2040 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	FER1L6	Q2WGJ9	1857 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ANKRD31	Q8N7Z5	1873 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TTC37	Q6PGP7	1564 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	BICRA	Q9NZM4	1560 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	ARHGAP31	Q2M1Z3	1444 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	PRG4	Q92954	1404 aa	Predicted RBP	0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV1D-37	A0A075B6S9	117 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	IGKV2D-26	A0A0A0MRZ7	120 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV6-7	A0A0A0MS04	114 aa		0.42	□□□□□ -2.34
HDAC9-222	ENST00000474742	TRBV10-1	A0A0K0K1A3	114 aa		0.42	□□□□□ -2.34

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