RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 KLK9Q2XQG4 91 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 FDCSPQ8NFU4 85 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 C21orf62Q9NYP8 219 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 KLK9Q9UKQ9 250 aa6.27□□□□□ -1.41
CCDC93-208ENST00000474546 TSSC4Q9Y5U2 329 aaPredicted RBP6.27□□□□□ -1.41
CCDC93-208ENST00000474546 TMEM213A2RRL7 107 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 M0R1W7 72 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 NKX2-8O15522 239 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 GOSR1O95249 250 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 CRIP1P50238 77 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 CCL8P80075 99 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 ZNF672Q499Z4 452 aaPredicted RBP6.26□□□□□ -1.41
CCDC93-208ENST00000474546 FAM201AQ5SY85 155 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 C1orf122Q6ZSJ8 110 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 DPM3Q9P2X0 92 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 DKK2Q9UBU2 259 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 TP73-AS1Q9UF72 201 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 DSCAMO60469 2012 aa6.26□□□□□ -1.41
CCDC93-208ENST00000474546 IGLV11-55A0A075B6I3 123 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 PRRG2O14669 202 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 FCN3O75636 299 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 EGR2P11161 476 aaPredicted RBP6.25□□□□□ -1.41
CCDC93-208ENST00000474546 CD24P25063 80 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 UTF1Q5T230 341 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 TMEM78Q5T7P6 136 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 MINOS1Q5TGZ0 78 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 PIP4P2Q8N4L2 257 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 GLMPQ8WWB7 406 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 CCL17Q92583 94 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 RNASE6Q93091 150 aaKnown RBP6.25□□□□□ -1.41
CCDC93-208ENST00000474546 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 SMR3AQ99954 134 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 GTSF1LQ9H1H1 148 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 MINOS1-NBL1R4GNA1 71 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 MGAM2Q2M2H8 2515 aa6.25□□□□□ -1.41
CCDC93-208ENST00000474546 HEATR1Q9H583 2144 aaKnown RBP6.25□□□□□ -1.41
CCDC93-208ENST00000474546 CENPVL3A0A0U1RRI6 287 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 LY6LH3BQJ8 138 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 IGHV3-48P01763 117 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 CRYBA4P53673 196 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 FOXI1Q12951 378 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 DUX4L9Q6RFH8 374 aaPredicted RBP6.24□□□□□ -1.41
CCDC93-208ENST00000474546 SEM1Q6ZVN7 128 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 Q8NA96 180 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TIMD4Q96H15 378 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 C8orf49Q96NF6 230 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 MCRIP2Q9BUT9 160 aaKnown RBP6.24□□□□□ -1.41
CCDC93-208ENST00000474546 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 FBXL15Q9H469 300 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 PRR14LQ5THK1 2151 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 HIVEP2P31629 2446 aa6.24□□□□□ -1.41
CCDC93-208ENST00000474546 TNCP24821 2201 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 TRBV7-3A0A075B6L6 115 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 H3BTX0 84 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 LOXL1Q08397 574 aaPredicted RBP6.23□□□□□ -1.41
CCDC93-208ENST00000474546 MRPL23Q16540 153 aaKnown RBP6.23□□□□□ -1.41
CCDC93-208ENST00000474546 C5orf64Q2M2E5 130 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 SPRNQ5BIV9 151 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 DTX2Q86UW9 622 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 TMEM141Q96I45 108 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 C18orf15Q96N68 181 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 FAM215AQ9Y5M1 114 aa6.23□□□□□ -1.41
CCDC93-208ENST00000474546 SVEP1Q4LDE5 3571 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 A8MWV9 139 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 FAM106CPP0CH98 169 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 FAM106AQ4KMX7 169 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 SPANXN1Q5VSR9 72 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 GFRALQ6UXV0 394 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 SCGB1D4Q6XE38 83 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 C8orf86Q6ZUL3 223 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 C9orf139Q6ZV77 190 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 GTSCR1Q86UQ5 136 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 LINC00477Q96M19 166 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 SCGB3A1Q96QR1 104 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 SPAG8Q99932 426 aaPredicted RBP6.22□□□□□ -1.41
CCDC93-208ENST00000474546 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 GEMIN7Q9H840 131 aaKnown RBP6.22□□□□□ -1.41
CCDC93-208ENST00000474546 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
CCDC93-208ENST00000474546 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 WNK1Q9H4A3 2382 aa6.22□□□□□ -1.41
CCDC93-208ENST00000474546 TMSB15BA0A087X1C1 80 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
CCDC93-208ENST00000474546 TRAV40A0A0B4J280 105 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 M0R3E3 92 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 SCGB1C2P0DMR2 95 aa6.21□□□□□ -1.42
CCDC93-208ENST00000474546 HLA-DMBP28068 263 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms