RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IGKCP01834 107 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 HBDP02042 147 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 CCKP06307 115 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 SLC25A4P12235 298 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 HIST1H1BP16401 226 aaKnown RBP0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 PCBD1P61457 104 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 COX6A2Q02221 97 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 ASB16-AS1Q495Z4 193 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 TMEM78Q5T7P6 136 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 OR5A2Q8NGI9 324 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 CDC26Q8NHZ8 85 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 BRK1Q8WUW1 75 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 TMEM141Q96I45 108 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 CARD19Q96LW7 228 aa0.05□□□□□ -2.4
ECHDC1-213ENST00000474240 C9JAW5 83 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 TMEM238C9JI98 176 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 H7BYZ3 331 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 MPC1LP0DKB6 136 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 ADCYAP1P18509 176 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 CRYBA4P53673 196 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 OR4S1Q8NGB4 309 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 PPDPFLQ8WWR9 84 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 BET1LQ9NYM9 111 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 FAM135BQ49AJ0 1406 aa0.04□□□□□ -2.4
ECHDC1-213ENST00000474240 BDP1A6H8Y1 2624 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 UNC13BO14795 1591 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 LAMC3Q9Y6N6 1575 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 TPRP12270 2363 aaKnown RBP0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 LOC107984640A0A0U1RRK4 108 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 ZNF670-ZNF695F2Z2N8 137 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 UQCRQO14949 82 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 SAMD13Q5VXD3 122 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 OR9Q1Q8NGQ5 310 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 OTOSQ8NHW6 89 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 THEM6Q8WUY1 208 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 TRAPPC2LQ9UL33 140 aa0.03□□□□□ -2.4
ECHDC1-213ENST00000474240 MEGF8Q7Z7M0 2845 aa0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 MYH3P11055 1940 aa0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 ZCCHC6Q5VYS8 1495 aaKnown RBP0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 A0A096LNT2 108 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 TRAV17A0A0B4J275 112 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 A0A1W2PRE2 83 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 M0QZK8 103 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 PLGLB1Q02325 96 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 BPESC1Q9GZL8 116 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 CBLN4Q9NTU7 201 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 TAS2R8Q9NYW2 309 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 CALML5Q9NZT1 146 aa0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 NCOR2Q9Y618 2525 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 G0S2P27469 103 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 RPL22P35268 128 aaKnown RBP0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 POLR2HP52434 150 aaKnown RBP0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 TOMM20LQ6UXN7 152 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 TMEM35BQ8NCS4 154 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 SKA2Q8WVK7 121 aaPredicted RBP0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 CCDC115Q96NT0 180 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 DLEC1Q9Y238 1755 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 ZFYVE26Q68DK2 2539 aa0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 TRAV2A0A0B4J234 112 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 TCRBV3S1A0A5B6 114 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 RBAKDNA6NC62 111 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 OR2H2O95918 312 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 IFITM1P13164 125 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 S100GP29377 79 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 HRCT1Q6UXD1 115 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 NAT14Q8WUY8 206 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 MAGOHBQ96A72 148 aaKnown RBP0□□□□□ -2.41
ECHDC1-213ENST00000474240 SLC35B3Q9H1N7 401 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 CENPHQ9H3R5 247 aa0□□□□□ -2.41
ECHDC1-213ENST00000474240 CDK13Q14004 1512 aaKnown RBP-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 PTPRGP23470 1445 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 CCDC171Q6TFL3 1326 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 BORCS7-ASMTA0A0B4J1R7 106 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 YPEL1O60688 119 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 APODP05090 189 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 PYYP10082 97 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 NEFHP12036 1026 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 GNG10P50151 68 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 AKR1D1P51857 326 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 HSD17B12Q53GQ0 312 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 METTL1Q9UBP6 276 aaKnown RBP-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 U3KQA8 63 aa-0.01□□□□□ -2.41
ECHDC1-213ENST00000474240 TTC28Q96AY4 2481 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 MED23Q9ULK4 1368 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 TANC2Q9HCD6 1990 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 SMIM24O75264 130 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 DPM2O94777 84 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 RBP4P02753 201 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 COX4I1P13073 169 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 TFAMQ00059 246 aaKnown RBP-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 CYP2G1PQ6ZSU1 146 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 OR8I2Q8N0Y5 310 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 MAP2P11137 1827 aaKnown RBP-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 ESPL1Q14674 2120 aa-0.02□□□□□ -2.41
ECHDC1-213ENST00000474240 MYH1P12882 1939 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 SOGA1O94964 1423 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 TANC1Q9C0D5 1861 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 TMEM128Q5BJH2 165 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 PPP1R2P3Q6NXS1 205 aa-0.03□□□□□ -2.41
ECHDC1-213ENST00000474240 NINQ8N4C6 2090 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms