RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, human

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-204	ENST00000474144	ZNF80	P51504	273 aa	Predicted RBP	13.66	□□□□□ -0.22
TMEM54-204	ENST00000474144	SUMO1	P63165	101 aa	Known RBP	13.66	□□□□□ -0.22
TMEM54-204	ENST00000474144	TTC32	Q5I0X7	151 aa		13.66	□□□□□ -0.22
TMEM54-204	ENST00000474144	C5orf17	Q8NAS9	161 aa		13.66	□□□□□ -0.22
TMEM54-204	ENST00000474144	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.66	□□□□□ -0.22
TMEM54-204	ENST00000474144	CXorf1	O96002	111 aa		13.65	□□□□□ -0.22
TMEM54-204	ENST00000474144	ZNF726P1	Q15940	193 aa		13.65	□□□□□ -0.22
TMEM54-204	ENST00000474144	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	IGLV2-11	P01706	119 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	SLA	Q13239	276 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	RGS21	Q2M5E4	152 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	IQCF2	Q8IXL9	164 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	TMEM167B	Q9NRX6	74 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	C11orf21	Q9P2W6	132 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	EPDR1	Q9UM22	224 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	PSG8	Q9UQ74	426 aa		13.64	□□□□□ -0.23
TMEM54-204	ENST00000474144	DNAH5	Q8TE73	4624 aa		13.63	□□□□□ -0.23
TMEM54-204	ENST00000474144	SERTM2	A0A1B0GWG4	89 aa		13.63	□□□□□ -0.23
TMEM54-204	ENST00000474144		A0A1W2PPQ1	181 aa		13.63	□□□□□ -0.23
TMEM54-204	ENST00000474144	LYPD5	Q6UWN5	251 aa		13.63	□□□□□ -0.23
TMEM54-204	ENST00000474144	SDF2L1	Q9HCN8	221 aa		13.63	□□□□□ -0.23
TMEM54-204	ENST00000474144		K7EQD1	137 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144		M0R2P5	195 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	SIVA1	O15304	175 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	NXPH4	O95158	308 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	MRPL23	Q16540	153 aa	Known RBP	13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	PRNT	Q86SH4	94 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	NDFIP1	Q9BT67	221 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	HSPG2	P98160	4391 aa		13.62	□□□□□ -0.23
TMEM54-204	ENST00000474144	TRAV4	A0A0B4J268	109 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	SMLR1	H3BR10	107 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	TMEM75	Q8N9X5	138 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	OR4C5	Q8NGB2	326 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	KCNS1	Q96KK3	526 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	LINC00479	Q96M42	142 aa		13.61	□□□□□ -0.23
TMEM54-204	ENST00000474144	C16orf90	A8MZG2	172 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144		K7EQM0	130 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	ARPC5	O15511	151 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	GCG	P01275	180 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	GYPE	P15421	78 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	FGF8	P55075	233 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	FLI1	Q01543	452 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	NEGR1	Q7Z3B1	354 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	CYB561D1	Q8N8Q1	229 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	CYTL1	Q9NRR1	136 aa		13.6	□□□□□ -0.23
TMEM54-204	ENST00000474144	TRAV34	A0A0B4J273	112 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144	LOC100131303	A0A0U1RQF7	123 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144	CTXND1	A0A1B0GTU2	59 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144		A0A1W2PRE2	83 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144	LINC00315	P59091	139 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144	UBE2G2	P60604	165 aa		13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144	APOB	P04114	4563 aa	Known RBP	13.59	□□□□□ -0.23
TMEM54-204	ENST00000474144		C9JCJ5	164 aa		13.58	□□□□□ -0.24
TMEM54-204	ENST00000474144	TAAR5	O14804	337 aa		13.58	□□□□□ -0.24
TMEM54-204	ENST00000474144	PFN1	P07737	140 aa	Known RBP	13.58	□□□□□ -0.24
TMEM54-204	ENST00000474144	SRI	P30626	198 aa		13.58	□□□□□ -0.24
TMEM54-204	ENST00000474144	SMUG1	Q53HV7	270 aa		13.58	□□□□□ -0.24
TMEM54-204	ENST00000474144	AKR1C8P	Q5T2L2	129 aa		13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144	DPPA3	Q6W0C5	159 aa		13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144	SPATA12	Q7Z6I5	190 aa		13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144	PCNP	Q8WW12	178 aa	Known RBP	13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144	TNFRSF18	Q9Y5U5	241 aa		13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144	ABCA13	Q86UQ4	5058 aa		13.57	□□□□□ -0.24
TMEM54-204	ENST00000474144		Q6ZRN7	208 aa	Predicted RBP	13.56	□□□□□ -0.24
TMEM54-204	ENST00000474144	FAM74A7	A6NL05	159 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	IFNA7	P01567	189 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	ORM1	P02763	201 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	ZNF876P	Q49A33	203 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	ZFP69	Q49AA0	526 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	WFDC10B	Q8IUB3	73 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	C9orf85	Q96MD7	179 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	ARL2-SNX15	V9GYD0	113 aa		13.55	□□□□□ -0.24
TMEM54-204	ENST00000474144	RNASE3	P12724	160 aa	Known RBP	13.54	□□□□□ -0.24
TMEM54-204	ENST00000474144	GATA1	P15976	413 aa	Predicted RBP	13.54	□□□□□ -0.24
TMEM54-204	ENST00000474144	BTF3	P20290	206 aa	Known RBP	13.54	□□□□□ -0.24
TMEM54-204	ENST00000474144	KRTAP10-2	P60368	255 aa		13.54	□□□□□ -0.24
TMEM54-204	ENST00000474144	SAPCD1	Q5SSQ6	148 aa		13.54	□□□□□ -0.24
TMEM54-204	ENST00000474144	IGHV3-73	A0A0B4J1V6	119 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	IGKV3D-20	A0A0C4DH25	116 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	PGPEP1L	A6NFU8	196 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	PEX7	O00628	323 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	RS1	O15537	224 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	CFAP126	Q5VTH2	177 aa		13.53	□□□□□ -0.24
TMEM54-204	ENST00000474144	MAP1LC3B2	A6NCE7	125 aa		13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144	FBLL1	A6NHQ2	334 aa	Known RBP	13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144	FHIT	P49789	147 aa		13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144	ZNF506	Q5JVG8	444 aa		13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144	TXNDC17	Q9BRA2	123 aa		13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144	MAP1LC3B	Q9GZQ8	125 aa		13.52	□□□□□ -0.25
TMEM54-204	ENST00000474144		Q86TA4	180 aa		13.51	□□□□□ -0.25
TMEM54-204	ENST00000474144	SLC25A29	Q8N8R3	303 aa		13.51	□□□□□ -0.25
TMEM54-204	ENST00000474144	OR11H4	Q8NGC9	324 aa		13.51	□□□□□ -0.25
TMEM54-204	ENST00000474144	LY96	Q9Y6Y9	160 aa		13.51	□□□□□ -0.25
TMEM54-204	ENST00000474144	KCNRG	Q8N5I3	272 aa		13.5	□□□□□ -0.25
TMEM54-204	ENST00000474144	NHLRC2	Q8NBF2	726 aa		13.5	□□□□□ -0.25
TMEM54-204	ENST00000474144	KRTAP4-5	Q9BYR2	181 aa		13.5	□□□□□ -0.25
TMEM54-204	ENST00000474144	FABP5P3	A8MUU1	101 aa		13.49	□□□□□ -0.25
TMEM54-204	ENST00000474144	CRIP1	P50238	77 aa		13.49	□□□□□ -0.25
TMEM54-204	ENST00000474144	PPT1	P50897	306 aa		13.49	□□□□□ -0.25
TMEM54-204	ENST00000474144	HIST1H2BA	Q96A08	127 aa		13.49	□□□□□ -0.25

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