RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 IGHV2-70DA0A0C4DH43 119 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 CENPVL3A0A0U1RRI6 287 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 E7EQL1 145 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 BPY2O14599 106 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 DEFB4AO15263 64 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 SIVA1O15304 175 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 WISP1O95388 367 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 IGHV4-38-2P0DP08 117 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 LYL1P12980 280 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 GP9P14770 177 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 Q6P435 159 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 Q6ZVH6 145 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 TEN1Q86WV5 123 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 HIGD2AQ9BW72 106 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 A0A0G2JRQ6 117 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 WI2-2373I1.2A0A1W2PRP0 233 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 HIST2H2BDQ6DRA6 164 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 VOPP1Q96AW1 172 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 DNAJC13O75165 2243 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 ASXL3Q9C0F0 2248 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 CCL24O00175 119 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 COX7BP24311 80 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 PCP2Q8IVA1 136 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 ZNF581Q9P0T4 197 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 BRWD1Q9NSI6 2320 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 JMJD7-PLA2G4BH0Y9G9 81 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 LGALS9O00182 355 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 ELANEP08246 267 aa5.44□□□□□ -1.54
BRCA1-210ENST00000471181 CSRP1P21291 193 aaKnown RBP5.44□□□□□ -1.54
BRCA1-210ENST00000471181 A4D1N5 150 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 GGNQ86UU5 652 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 UBE2D4Q9Y2X8 147 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 IGLC1P0CG04 106 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 HRCT1Q6UXD1 115 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 RPL39LQ96EH5 51 aaKnown RBP5.43□□□□□ -1.54
BRCA1-210ENST00000471181 ARID1AO14497 2285 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 UBE2D1P51668 147 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 KIR2DL5BQ8NHK3 375 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 RETNQ9HD89 108 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 SNRNP200O75643 2136 aaKnown RBP5.43□□□□□ -1.54
BRCA1-210ENST00000471181 TRPM6Q9BX84 2022 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 FAM236DA0A1B0GTK5 79 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 FAM236CP0DP71 79 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 FAM19A1Q7Z5A9 133 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 FGF23Q9GZV9 251 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-210ENST00000471181 V9GYV3 84 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 MIA3Q5JRA6 1907 aa5.43□□□□□ -1.54
BRCA1-210ENST00000471181 SLURP1P55000 103 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 C11orf52Q96A22 123 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 ZFC3H1O60293 1989 aaKnown RBP5.42□□□□□ -1.54
BRCA1-210ENST00000471181 G3V4G9 280 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 GATA1P15976 413 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-210ENST00000471181 DOCK1Q14185 1865 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 A0A087WZ39 114 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 IGHV4-61A0A0C4DH41 118 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 PLXNB2O15031 1838 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 TMEM256-PLSCR3K7ERE1 68 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 Q6ZUT4 128 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 NDUFA4L2Q9NRX3 87 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 KNL1Q8NG31 2342 aa5.42□□□□□ -1.54
BRCA1-210ENST00000471181 J3QKU1 62 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 PLA2G2AP14555 144 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 LHFPL1Q86WI0 220 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 LYPD6BQ8NI32 183 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 REG4Q9BYZ8 158 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 J3QLI3 93 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 DAZ2Q13117 558 aaKnown RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 IL15RAQ13261 267 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 PRR30Q53SZ7 412 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 DAZ4Q86SG3 579 aaKnown RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 DAZ3Q9NR90 486 aaKnown RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 KLK12Q9UKR0 248 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 IGKV1D-37A0A075B6S9 117 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 A0A0J9YXV3 536 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 IGKV1-17P01599 117 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 IGHV2-70P01814 119 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 MST1P26927 711 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 EIF4EBP2Q13542 120 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 Q6ZRM9 215 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 SERP2Q8N6R1 65 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 RNF152Q8N8N0 203 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 LOXL1Q08397 574 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-210ENST00000471181 TMEM14CQ9P0S9 112 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 HHLA3Q9XRX5 114 aa5.41□□□□□ -1.54
BRCA1-210ENST00000471181 ADCYAP1P18509 176 aa5.4□□□□□ -1.54
BRCA1-210ENST00000471181 ZNF833PQ6ZTB9 187 aa5.4□□□□□ -1.54
BRCA1-210ENST00000471181 RNF144BQ7Z419 303 aa5.4□□□□□ -1.54
BRCA1-210ENST00000471181 MYO16Q9Y6X6 1858 aa5.4□□□□□ -1.54
BRCA1-210ENST00000471181 IGLV3-32A0A0A0MS00 114 aa5.4□□□□□ -1.55
BRCA1-210ENST00000471181 PNRC2Q9NPJ4 139 aaKnown RBP5.4□□□□□ -1.55
BRCA1-210ENST00000471181 SPTA1P02549 2419 aa5.4□□□□□ -1.55
BRCA1-210ENST00000471181 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.55
BRCA1-210ENST00000471181 LINC01545Q5VT33 79 aa5.4□□□□□ -1.55
BRCA1-210ENST00000471181 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.55
BRCA1-210ENST00000471181 F5P12259 2224 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms