RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 C8orf88P0DMB2 117 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 IGLC2P0DOY2 106 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 NPPCP23582 126 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 CRYBB3P26998 211 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 RPL29P47914 159 aaKnown RBP2.64□□□□□ -1.99
COL9A1-206ENST00000470652 ATP5G3P48201 142 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 GUCA2BQ16661 112 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 ATP6V1FQ16864 119 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 TMEM41BQ5BJD5 291 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 BAP18Q8IXM2 172 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 DEFB125Q8N687 156 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 STXBP6Q8NFX7 210 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 OR10G4Q8NGN3 311 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 OR10G9Q8NGN4 311 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 STOML3Q8TAV4 291 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 DYNLRB2Q8TF09 96 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 ASB13Q8WXK3 278 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 METTL26Q96S19 204 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 TXN2Q99757 166 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 RARRES2Q99969 163 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 GGACTQ9BVM4 153 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 MS4A6AQ9H2W1 248 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 TMEM231Q9H6L2 316 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 RETNQ9HD89 108 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 DAZ1Q9NQZ3 744 aaKnown RBP2.64□□□□□ -1.99
COL9A1-206ENST00000470652 CACFD1Q9UGQ2 172 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 RPH3ALQ9UNE2 315 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 YTHDF2Q9Y5A9 579 aaKnown RBP2.64□□□□□ -1.99
COL9A1-206ENST00000470652 NBEAL2Q6ZNJ1 2754 aa2.64□□□□□ -1.99
COL9A1-206ENST00000470652 TRAV30A0A087WSZ9 112 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 IGKV2-40A0A087WW87 121 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 TRAV8-1A0A0A6YYK1 113 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 BORCS7-ASMTA0A0B4J1R7 106 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 MAP1LC3B2A6NCE7 125 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ZNF705EA8MWA4 302 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 GGTLC3B5MD39 225 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 FNDC10F2Z333 226 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 LGALS9O00182 355 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 CYB5BO43169 146 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 OR7C2O60412 319 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 IGKV2D-40P01614 121 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 IGLV1-51P01701 117 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 NMBP08949 121 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 TPT1P13693 172 aaKnown RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 M6PRP20645 277 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 GCHFRP30047 84 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 CDC34P49427 236 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 SULT1A2P50226 295 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ATP5IP56385 69 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 PLP1P60201 277 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ERCC8Q13216 396 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ZNF266Q14584 549 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 AKR1C8PQ5T2L2 129 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 SLC51BQ86UW2 128 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 OR8I2Q8N0Y5 310 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ZNF709Q8N972 641 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 ZNF680Q8NEM1 530 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 WFDC9Q8NEX5 89 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 Q8TAT8 98 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 DCANP1Q8TF63 244 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 MARC2Q969Z3 335 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 LINC00052Q96N35 136 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 PSMG3Q9BT73 122 aaPredicted RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 MAP1LC3BQ9GZQ8 125 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 FUT9Q9Y231 359 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 UFC1Q9Y3C8 167 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 TIMM9Q9Y5J7 89 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
COL9A1-206ENST00000470652 DNAH1Q9P2D7 4330 aa2.63□□□□□ -1.99
COL9A1-206ENST00000470652 A0A0U1RRA0 63 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 FBLL1A6NHQ2 334 aaKnown RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 E9PLD3 99 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 C17orf112F2Z3M2 114 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 K7EIL1 84 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 K7EMT4 169 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 TAAR5O14804 337 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 STAG3L2P0CL84 134 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 STAG3L3P0CL85 134 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 RBMY1A1P0DJD3 496 aaKnown RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 RBMY1CP0DJD4 496 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 DEFB131AP59861 70 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 RANP62826 216 aaKnown RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 RAB31Q13636 194 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 RBMY1FQ15415 496 aaKnown RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 ACOT6Q3I5F7 207 aaPredicted RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 KRTAP21-3Q3LHN1 58 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 PSMG4Q5JS54 123 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 PRR9Q5T870 116 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 TEX261Q6UWH6 196 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 SFT2D1Q8WV19 159 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 DERL1Q9BUN8 251 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 GPR61Q9BZJ8 451 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 ACTR3CQ9C0K3 210 aaPredicted RBP2.62□□□□□ -1.99
COL9A1-206ENST00000470652 OR51M1Q9H341 326 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 GNG13Q9P2W3 67 aa2.62□□□□□ -1.99
COL9A1-206ENST00000470652 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
COL9A1-206ENST00000470652 PLECQ15149 4684 aaKnown RBP2.61□□□□□ -1.99
COL9A1-206ENST00000470652 SACSQ9NZJ4 4579 aa2.61□□□□□ -1.99
COL9A1-206ENST00000470652 TRBV19A0A075B6N1 114 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms