RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 INPP1P49441 399 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 RANP62826 216 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 PHYHIPLQ96FC7 376 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 PAXXQ9BUH6 204 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 SH3BGRL3Q9H299 93 aa12.38□□□□□ -0.43
NCKIPSD-209ENST00000470006 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 CCSO14618 274 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 IGLV2-11P01706 119 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 ZNF876PQ49A33 203 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 FAM167A-AS1Q96KT0 104 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 SDF2L1Q9HCN8 221 aa12.37□□□□□ -0.43
NCKIPSD-209ENST00000470006 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 NOL3O60936 208 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 TYMSP04818 313 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 PVALBP20472 110 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 HBG1P69891 147 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 HBG2P69892 147 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 MRPS26Q9BYN8 205 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 LENEPQ9Y5L5 61 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
NCKIPSD-209ENST00000470006 LRP2P98164 4655 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 CIDEAO60543 219 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 SULT1A1P50225 295 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 STX12Q86Y82 276 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 FXYD5Q96DB9 178 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 HYLS1Q96M11 299 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 RPH3ALQ9UNE2 315 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 V9GYH0 126 aa12.35□□□□□ -0.43
NCKIPSD-209ENST00000470006 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
NCKIPSD-209ENST00000470006 OR7C2O60412 319 aa12.34□□□□□ -0.43
NCKIPSD-209ENST00000470006 TMBIM6P55061 237 aa12.34□□□□□ -0.43
NCKIPSD-209ENST00000470006 MITD1Q8WV92 249 aa12.34□□□□□ -0.43
NCKIPSD-209ENST00000470006 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 DIRC3C9JPN6 131 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 S100A10P60903 97 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 GAGE1Q13065 139 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 GAGE4Q13068 117 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 GAGE5Q13069 117 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 KCNS1Q96KK3 526 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 NPCDR1Q9BY65 106 aa12.33□□□□□ -0.44
NCKIPSD-209ENST00000470006 F6UZH7 168 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 MGST1P10620 155 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 S100A5P33763 92 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 ASIPP42127 132 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 ATP6V1FQ16864 119 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 SPANXN2Q5MJ10 180 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
NCKIPSD-209ENST00000470006 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 SEC11BP0C7V7 166 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 TMEM252Q8N6L7 170 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 C2orf50Q96LR7 162 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 NMES1Q9C002 83 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
NCKIPSD-209ENST00000470006 C14orf177Q52M58 125 aa12.3□□□□□ -0.44
NCKIPSD-209ENST00000470006 TRIQKQ629K1 86 aa12.3□□□□□ -0.44
NCKIPSD-209ENST00000470006 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
NCKIPSD-209ENST00000470006 THAP6Q8TBB0 222 aa12.3□□□□□ -0.44
NCKIPSD-209ENST00000470006 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
NCKIPSD-209ENST00000470006 A0A087WWC5 75 aa12.29□□□□□ -0.44
NCKIPSD-209ENST00000470006 UBE2L3P68036 154 aaKnown RBP12.29□□□□□ -0.44
NCKIPSD-209ENST00000470006 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
NCKIPSD-209ENST00000470006 C11orf1Q9H5F2 150 aa12.29□□□□□ -0.44
NCKIPSD-209ENST00000470006 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
NCKIPSD-209ENST00000470006 H3BMQ9 156 aa12.28□□□□□ -0.44
NCKIPSD-209ENST00000470006 Q6ZRU5 148 aa12.28□□□□□ -0.44
NCKIPSD-209ENST00000470006 CENPXA8MT69 81 aa12.27□□□□□ -0.45
NCKIPSD-209ENST00000470006 KCNIP4Q6PIL6 250 aa12.27□□□□□ -0.45
NCKIPSD-209ENST00000470006 CYB561D1Q8N8Q1 229 aa12.27□□□□□ -0.45
NCKIPSD-209ENST00000470006 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
NCKIPSD-209ENST00000470006 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
NCKIPSD-209ENST00000470006 FFAR4Q5NUL3 377 aa12.26□□□□□ -0.45
NCKIPSD-209ENST00000470006 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
NCKIPSD-209ENST00000470006 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
NCKIPSD-209ENST00000470006 A0A087WX48 190 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 PGPA6NDG6 321 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 PGPEP1LA6NFU8 196 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 FAM74A1Q5RGS3 127 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 NIT1Q86X76 327 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
NCKIPSD-209ENST00000470006 ELOBQ15370 118 aa12.24□□□□□ -0.45
NCKIPSD-209ENST00000470006 TVP23CQ96ET8 276 aa12.24□□□□□ -0.45
NCKIPSD-209ENST00000470006 A0A0D9SG52 128 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 FGF8P55075 233 aaPredicted RBP12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 NHLH2Q02577 135 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 RAB32Q13637 225 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 OR5C1Q8NGR4 320 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 SAMD10Q9BYL1 202 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 OTORQ9NRC9 128 aa12.23□□□□□ -0.45
NCKIPSD-209ENST00000470006 LGALSLQ3ZCW2 172 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms