RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
TRAPPC12-216ENST00000469400 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
TRAPPC12-216ENST00000469400 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
TRAPPC12-216ENST00000469400 GTSF1LQ9H1H1 148 aa8.4□□□□□ -1.06
TRAPPC12-216ENST00000469400 LENEPQ9Y5L5 61 aa8.4□□□□□ -1.06
TRAPPC12-216ENST00000469400 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 IGSF23A1L1A6 192 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 FAM25EA8MYX2 175 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 RS1O15537 224 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 TYMSP04818 313 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 INPP1P49441 399 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 RANP62826 216 aaKnown RBP8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 HBG1P69891 147 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 HBG2P69892 147 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 RHOHQ15669 191 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 ACOT6Q3I5F7 207 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 TMEM252Q8N6L7 170 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 LYRM2Q9NU23 88 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-216ENST00000469400 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 DIRC3C9JPN6 131 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 PVALBP20472 110 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 BTCP35070 178 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 ATP6V1FQ16864 119 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 SPANXN2Q5MJ10 180 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 DAZ4Q86SG3 579 aaKnown RBP8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 STX12Q86Y82 276 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 Q8N976 141 aa8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 DAZ3Q9NR90 486 aaKnown RBP8.38□□□□□ -1.07
TRAPPC12-216ENST00000469400 RNF222A6NCQ9 220 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 TOR2AQ5JU69 321 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 TRIQKQ629K1 86 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 THAP6Q8TBB0 222 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 SDF2L1Q9HCN8 221 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 COX11Q9Y6N1 276 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
TRAPPC12-216ENST00000469400 TRAV21A0A0B4J279 112 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 CIDEAO60543 219 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 HNRNPA3P51991 378 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 S100A10P60903 97 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 TMED6Q8WW62 240 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 DAZAP1Q96EP5 407 aaKnown RBP8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 ATP5SQ99766 215 aa8.36□□□□□ -1.07
TRAPPC12-216ENST00000469400 CENPXA8MT69 81 aa8.35□□□□□ -1.07
TRAPPC12-216ENST00000469400 OR7C2O60412 319 aa8.35□□□□□ -1.07
TRAPPC12-216ENST00000469400 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
TRAPPC12-216ENST00000469400 CCDC32Q9BV29 185 aa8.35□□□□□ -1.07
TRAPPC12-216ENST00000469400 F6UZH7 168 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 IGLV2-11P01706 119 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 MGST1P10620 155 aaKnown RBP8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 IL15RAQ13261 267 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 RAB32Q13637 225 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 ASB13Q8WXK3 278 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 RMI2Q96E14 147 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 TVP23CQ96ET8 276 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 KCNS1Q96KK3 526 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 DNAJC30Q96LL9 226 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 SH3BGRL3Q9H299 93 aa8.34□□□□□ -1.07
TRAPPC12-216ENST00000469400 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
TRAPPC12-216ENST00000469400 NHLH2Q02577 135 aa8.33□□□□□ -1.08
TRAPPC12-216ENST00000469400 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
TRAPPC12-216ENST00000469400 RPH3ALQ9UNE2 315 aa8.33□□□□□ -1.08
TRAPPC12-216ENST00000469400 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 GAGE1Q13065 139 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 GAGE4Q13068 117 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 GAGE5Q13069 117 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 GAGE13Q4V321 117 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 OR5C1Q8NGR4 320 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 SDHCQ99643 169 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 SEC22CQ9BRL7 303 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 NMES1Q9C002 83 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 OTORQ9NRC9 128 aa8.32□□□□□ -1.08
TRAPPC12-216ENST00000469400 LRP2P98164 4655 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 PGPA6NDG6 321 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 PGPEP1LA6NFU8 196 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 UPK1BO75841 260 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 GOLT1AQ6ZVE7 132 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 CMTM2Q8TAZ6 248 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 C9orf85Q96MD7 179 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 KCNIP2Q9NS61 270 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 Q9UF83 564 aa8.31□□□□□ -1.08
TRAPPC12-216ENST00000469400 A0A087WWC5 75 aa8.3□□□□□ -1.08
TRAPPC12-216ENST00000469400 CYB561D1Q8N8Q1 229 aa8.3□□□□□ -1.08
TRAPPC12-216ENST00000469400 PTH2Q96A98 100 aa8.3□□□□□ -1.08
TRAPPC12-216ENST00000469400 WDR61Q9GZS3 305 aaKnown RBP8.3□□□□□ -1.08
TRAPPC12-216ENST00000469400 C11orf21Q9P2W6 132 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms