RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 RETNQ9HD89 108 aa2.53□□□□□ -2
TRIM59-202ENST00000468542 TREM1Q9NP99 234 aa2.53□□□□□ -2
TRIM59-202ENST00000468542 VAX2Q9UIW0 290 aa2.53□□□□□ -2
TRIM59-202ENST00000468542 YTHDF2Q9Y5A9 579 aaKnown RBP2.53□□□□□ -2
TRIM59-202ENST00000468542 TIMM8BQ9Y5J9 83 aaPredicted RBP2.53□□□□□ -2
TRIM59-202ENST00000468542 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2
TRIM59-202ENST00000468542 TRGV11A0A075B6L2 103 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 TRAV12-2A0A075B6T6 113 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 IGHV1OR15-1A0A075B7D0 117 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 TRAV8-1A0A0A6YYK1 113 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 A0A0J9YWU9 116 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 LOC102723971A0A1B0GUV8 181 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 PLAC8L1A1L4L8 177 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 CXorf65A6NEN9 183 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 C9JCJ5 164 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 CIDEAO60543 219 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 EIF3GO75821 320 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRIM59-202ENST00000468542 CXCL1P09341 107 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 RBMY1A1P0DJD3 496 aaKnown RBP2.52□□□□□ -2.01
TRIM59-202ENST00000468542 RBMY1CP0DJD4 496 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 RNASE4P34096 147 aaKnown RBP2.52□□□□□ -2.01
TRIM59-202ENST00000468542 ATP5G3P48201 142 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 TCL1AP56279 114 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 UBE2G2P60604 165 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 UBE2G1P62253 170 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 GNG5P63218 68 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 CCL20P78556 96 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 ERCC8Q13216 396 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 RBMY1FQ15415 496 aaKnown RBP2.52□□□□□ -2.01
TRIM59-202ENST00000468542 SMUG1Q53HV7 270 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 ZNF506Q5JVG8 444 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 DNLZQ5SXM8 178 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 TMEM183AQ8IXX5 376 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
TRIM59-202ENST00000468542 LINC00612Q8N6U2 182 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 C11orf72Q8NBR9 251 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 Q8TAT8 98 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 PTH2Q96A98 100 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 LINC01587Q99440 93 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 MLST8Q9BVC4 326 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 BIN3Q9NQY0 253 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 GNG13Q9P2W3 67 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 DKK2Q9UBU2 259 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 PLA2G2DQ9UNK4 145 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 PSG8Q9UQ74 426 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
TRIM59-202ENST00000468542 NACAE9PAV3 2078 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 IGHV3OR16-12A0A075B7B8 117 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 TRAV10A0A0B4J240 114 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 TRAV12-3A0A0B4J271 114 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 RBFOX3A6NFN3 312 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 CBY3A6NI87 242 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FABP5P3A8MUU1 101 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 SNURFLB1AK76 121 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 H3BNG1 76 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 GCGP01275 180 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 AKR1C3P42330 323 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 RPL35P42766 123 aaKnown RBP2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FXYD7P58549 80 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 ZNF415Q09FC8 603 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 BTN1A1Q13410 526 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 ZNF674Q2M3X9 581 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 CASC10Q5T4H9 136 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FAM162BQ5T6X4 162 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 PRR9Q5T870 116 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FAM222AQ5U5X8 452 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 CEMP1Q6PRD7 247 aaPredicted RBP2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FAM159AQ6UWV7 190 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 ZNF767PQ75MW2 155 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 PRNTQ86SH4 94 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 BAGE2Q86Y30 109 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 RASL10AQ92737 203 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 FAM210AQ96ND0 272 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 SPXQ9BT56 116 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 SDF2L1Q9HCN8 221 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 AP5S1Q9NUS5 200 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 IL36BQ9NZH7 164 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 RPH3ALQ9UNE2 315 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 KLK5Q9Y337 293 aaPredicted RBP2.51□□□□□ -2.01
TRIM59-202ENST00000468542 LY96Q9Y6Y9 160 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 MUC4Q99102 2169 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 DNAH2Q9P225 4427 aa2.51□□□□□ -2.01
TRIM59-202ENST00000468542 TRBV20OR9-2A0A075B6H5 130 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 TRAV34A0A0B4J273 112 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 IGKV3D-20A0A0C4DH25 116 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 IGHV3-16A0A0C4DH30 117 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 ZNF705GA8MUZ8 300 aaPredicted RBP2.5□□□□□ -2.01
TRIM59-202ENST00000468542 M0R2P5 195 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 SPINK4O60575 86 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 ATP5G1P05496 136 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 AZU1P20160 251 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 GNG4P50150 75 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 RAB14P61106 215 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 SLAQ13239 276 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 C12orf74Q32Q52 190 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 FAM74A3Q4VXF1 159 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 CENPWQ5EE01 88 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 CLLU1Q5K131 121 aa2.5□□□□□ -2.01
TRIM59-202ENST00000468542 PHLDA1Q8WV24 401 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms