RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 ZNF345Q14585 488 aa9.22□□□□□ -0.93
C9orf3-212ENST00000468164 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
C9orf3-212ENST00000468164 PCNPQ8WW12 178 aaKnown RBP9.22□□□□□ -0.93
C9orf3-212ENST00000468164 TREM1Q9NP99 234 aa9.22□□□□□ -0.93
C9orf3-212ENST00000468164 LENEPQ9Y5L5 61 aa9.22□□□□□ -0.93
C9orf3-212ENST00000468164 KANTRA0A1W2PQU2 76 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 SRIP30626 198 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 AKR1C8PQ5T2L2 129 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 LYPD5Q6UWN5 251 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 IQCF2Q8IXL9 164 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 KCNRGQ8N5I3 272 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 RAB24Q969Q5 203 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 SPXQ9BT56 116 aa9.21□□□□□ -0.94
C9orf3-212ENST00000468164 TRAV21A0A0B4J279 112 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 PFDN1O60925 122 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 GYPEP15421 78 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
C9orf3-212ENST00000468164 Q6ZNX1 250 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 OR4C5Q8NGB2 326 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 TMED6Q8WW62 240 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 TVP23CQ96ET8 276 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 SDF2L1Q9HCN8 221 aa9.2□□□□□ -0.94
C9orf3-212ENST00000468164 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 K7EQD1 137 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 CXorf1O96002 111 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 TYMSP04818 313 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 STAG3L2P0CL84 134 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 STAG3L3P0CL85 134 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 KRTAP10-2P60368 255 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 MAPKAPK5-AS1Q8N8E1 139 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 OR11H4Q8NGC9 324 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 RASL10AQ92737 203 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 ZNF471Q9BX82 626 aaPredicted RBP9.19□□□□□ -0.94
C9orf3-212ENST00000468164 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 CYTL1Q9NRR1 136 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 TNFRSF18Q9Y5U5 241 aa9.19□□□□□ -0.94
C9orf3-212ENST00000468164 hCG_2014768A0A024R1R8 64 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 C9JCJ5 164 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 K7EQM0 130 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 M0R2P5 195 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 BCL2L11O43521 198 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 GCHFRP30047 84 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 TDRG1Q3Y452 100 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 NHLRC2Q8NBF2 726 aa9.18□□□□□ -0.94
C9orf3-212ENST00000468164 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
C9orf3-212ENST00000468164 TRAV4A0A0B4J268 109 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 CTXND1A0A1B0GTU2 59 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 TCRAP04437 139 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 FUSP35637 526 aaKnown RBP eCLIP9.17□□□□□ -0.94
C9orf3-212ENST00000468164 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 WFDC10BQ8IUB3 73 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 TCTE3Q8IZS6 198 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 C5orf17Q8NAS9 161 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
C9orf3-212ENST00000468164 TRAV9-2A0A087WT02 112 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 CDK2AP2O75956 126 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 GCGP01275 180 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 ORM1P02763 201 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 BTF3P20290 206 aaKnown RBP9.16□□□□□ -0.94
C9orf3-212ENST00000468164 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
C9orf3-212ENST00000468164 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
C9orf3-212ENST00000468164 ZFP69Q49AA0 526 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 TMUB2Q71RG4 321 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 TMEM75Q8N9X5 138 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 STOML3Q8TAV4 291 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 TXNDC17Q9BRA2 123 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 PSG8Q9UQ74 426 aa9.16□□□□□ -0.94
C9orf3-212ENST00000468164 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.94
C9orf3-212ENST00000468164 EREGO14944 169 aa9.15□□□□□ -0.94
C9orf3-212ENST00000468164 SEC11BP0C7V7 166 aa9.15□□□□□ -0.94
C9orf3-212ENST00000468164 TPT1P13693 172 aaKnown RBP9.15□□□□□ -0.94
C9orf3-212ENST00000468164 ERVFC1-1P60608 527 aa9.15□□□□□ -0.94
C9orf3-212ENST00000468164 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
C9orf3-212ENST00000468164 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
C9orf3-212ENST00000468164 SERTM2A0A1B0GWG4 89 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 MAP1LC3B2A6NCE7 125 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 FBLL1A6NHQ2 334 aaKnown RBP9.14□□□□□ -0.95
C9orf3-212ENST00000468164 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 EVI2AP22794 236 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 PPT1P50897 306 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 UBE2G2P60604 165 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
C9orf3-212ENST00000468164 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 MAP1LC3BQ9GZQ8 125 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
C9orf3-212ENST00000468164 IFNA7P01567 189 aa9.13□□□□□ -0.95
C9orf3-212ENST00000468164 C1QBP02746 253 aa9.13□□□□□ -0.95
C9orf3-212ENST00000468164 DNAH10OSP0CZ25 163 aa9.13□□□□□ -0.95
C9orf3-212ENST00000468164 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
C9orf3-212ENST00000468164 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
C9orf3-212ENST00000468164 SMUG1Q53HV7 270 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms