RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 TMEM144Q7Z5S9 345 aa6.2□□□□□ -1.42
PTPDC1-203ENST00000467049 OR8A1Q8NGG7 326 aa6.2□□□□□ -1.42
PTPDC1-203ENST00000467049 TMEM263Q8WUH6 116 aaKnown RBP6.2□□□□□ -1.42
PTPDC1-203ENST00000467049 SLC25A39Q9BZJ4 359 aaPredicted RBP6.2□□□□□ -1.42
PTPDC1-203ENST00000467049 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
PTPDC1-203ENST00000467049 A0A087X0K7 114 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 PRSS46E5RG02 174 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 H3BP45 60 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 M0R143 59 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 EREGO14944 169 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 IAPPP10997 89 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 SLC38A11Q08AI6 406 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 RNF182Q8N6D2 247 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 C20orf144Q9BQM9 153 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 A0A1B0GV50 99 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 INAFM2P0DMQ5 153 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 RPL7P18124 248 aaKnown RBP6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 ORM2P19652 201 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 AKR1C3P42330 323 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 RHOBP62745 196 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 CCL20P78556 96 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 HIST1H1AQ02539 215 aaPredicted RBP6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 SLAQ13239 276 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 PSG3Q16557 428 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 IGFL4Q6B9Z1 124 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 TMEM14EPQ6UXP3 125 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 ZNF479Q96JC4 524 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 SPXQ9BT56 116 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 NOP10Q9NPE3 64 aaKnown RBP6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 TMEM242Q9NWH2 141 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
PTPDC1-203ENST00000467049 TRAV26-1A0A087WT03 109 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 MAP1LC3B2A6NCE7 125 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 C17orf112F2Z3M2 114 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 H7BYZ3 331 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 SNRPCP09234 159 aaKnown RBP6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 ESRGQ1W209 222 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 SPANXN5Q5MJ07 72 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 MAP1LC3BQ9GZQ8 125 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 CTDSP1Q9GZU7 261 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 MANBALQ9NQG1 85 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 GNG13Q9P2W3 67 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 HERC1Q15751 4861 aa6.18□□□□□ -1.42
PTPDC1-203ENST00000467049 UBE2L5PA0A1B0GUS4 154 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 GATA2P23769 480 aaPredicted RBP6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 PLP1P60201 277 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 DLK1P80370 383 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 OR5I1Q13606 314 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 Q6ZRN7 208 aaPredicted RBP6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 OR10P1Q8NGE3 313 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 ISOC2Q96AB3 205 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 YPEL4Q96NS1 127 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 PGPEP1Q9NXJ5 209 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 NAGKQ9UJ70 344 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 CTXND1A0A1B0GTU2 59 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 TMEM250H0YL14 139 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 LINC00315P59091 139 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 S100A7AQ86SG5 101 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 UHRF2Q96PU4 802 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 KCNIP2Q9NS61 270 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 SLC39A9Q9NUM3 307 aa6.17□□□□□ -1.42
PTPDC1-203ENST00000467049 A0A0J9YY99 117 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 MPDU1O75352 247 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 HYPMO75409 117 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 HTN1P15515 57 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 UBE2G2P60604 165 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 ARL16Q0P5N6 197 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 VWC2Q2TAL6 325 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 RPUSD4Q96CM3 377 aaKnown RBP6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 ACTR3CQ9C0K3 210 aaPredicted RBP6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 PRO1933Q9H354 126 aa6.16□□□□□ -1.42
PTPDC1-203ENST00000467049 H0Y8G0 127 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 FGF7P21781 194 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 RPS10P46783 165 aaKnown RBP6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 XGP55808 180 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 ERVFC1-1P60608 527 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 SELENOTP62341 195 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 NAT8Q9UHE5 227 aa6.15□□□□□ -1.42
PTPDC1-203ENST00000467049 GAGE12BA1L429 117 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 SMCO3A2RU48 225 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 IFITM10A6NMD0 228 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 SNURFLB1AK76 121 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 MRPS12O15235 138 aaKnown RBP6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 GAGE7O76087 117 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 LINC00869P0C866 280 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 GAGE12FP0CL80 117 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 GAGE12GP0CL81 117 aa6.15□□□□□ -1.43
PTPDC1-203ENST00000467049 GAGE12IP0CL82 117 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms