RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 LYZL2Q7Z4W2 148 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 NHLRC2Q8NBF2 726 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 PARD6GQ9BYG4 376 aaPredicted RBP3.69□□□□□ -1.82
CXXC4-202ENST00000466963 GPN1Q9HCN4 374 aaPredicted RBP3.69□□□□□ -1.82
CXXC4-202ENST00000466963 OTORQ9NRC9 128 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 PANO1I0J062 215 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 CTDSP2O14595 271 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 CAMLGP49069 296 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 Q6ZNX1 250 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 UQCC1Q9NVA1 299 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 COMMD3Q9UBI1 195 aa3.69□□□□□ -1.82
CXXC4-202ENST00000466963 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 CRPP02741 224 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 ASB13Q8WXK3 278 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 C9orf85Q96MD7 179 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 SMCO3A2RU48 225 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 L7N2F9 121 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 VAMP2P63027 116 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 KHDC3LQ587J8 217 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 SAPCD1Q5SSQ6 148 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 MRPL16Q9NX20 251 aaKnown RBP3.68□□□□□ -1.82
CXXC4-202ENST00000466963 CARHSP1Q9Y2V2 147 aaKnown RBP3.68□□□□□ -1.82
CXXC4-202ENST00000466963 DEFB1P60022 68 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 STX12Q86Y82 276 aa3.68□□□□□ -1.82
CXXC4-202ENST00000466963 SSBP4Q9BWG4 385 aaPredicted RBP3.68□□□□□ -1.82
CXXC4-202ENST00000466963 MRPL18Q9H0U6 180 aaKnown RBP3.68□□□□□ -1.82
CXXC4-202ENST00000466963 SRRM2Q9UQ35 2752 aaKnown RBP3.67□□□□□ -1.82
CXXC4-202ENST00000466963 IGLV1-50A0A075B6I6 118 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 BAXQ07812 192 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
CXXC4-202ENST00000466963 ZNF479Q96JC4 524 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 A0A087WX48 190 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 NBEAP1P0C6P0 100 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 PI3P19957 117 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 BTN1A1Q13410 526 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 MITD1Q8WV92 249 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 SLIRPQ9GZT3 109 aaKnown RBP3.67□□□□□ -1.82
CXXC4-202ENST00000466963 FAT1Q14517 4588 aa3.67□□□□□ -1.82
CXXC4-202ENST00000466963 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 FAM231BA6NCW3 169 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 IAPPP10997 89 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 CFAP126Q5VTH2 177 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 DNAJC30Q96LL9 226 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 NKX6-2Q9C056 277 aaPredicted RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 E5RGE8 158 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 H3BMQ9 156 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 SULT1A1P50225 295 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 S100A10P60903 97 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 RPL36AP83881 106 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 SLC38A11Q08AI6 406 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 IAH1Q2TAA2 248 aaPredicted RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 ZFP69Q49AA0 526 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 PQLC2Q6ZP29 291 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 COX8CQ7Z4L0 72 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 SLC25A29Q8N8R3 303 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 RPL36ALQ969Q0 106 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 SOSTQ9BQB4 213 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 PARLQ9H300 379 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 PRR34Q9NV39 138 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 OR5AC2Q9NZP5 309 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 H3BQ15 152 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 NDUFB4O95168 129 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 GATA2P23769 480 aaPredicted RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 CD300CQ08708 224 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 DAZ4Q86SG3 579 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 MGST2Q99735 147 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 Q9HAA7 133 aa3.66□□□□□ -1.82
CXXC4-202ENST00000466963 DAZ3Q9NR90 486 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 PAIP2BQ9ULR5 123 aaKnown RBP3.66□□□□□ -1.82
CXXC4-202ENST00000466963 IGKV2D-24A0A075B6R9 120 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 TRBV6-1A0A0K0K1D8 114 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 PRAC2D3DTV9 90 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 IFNA7P01567 189 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 IGHV3-53P01767 116 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 Q6ZRP5 223 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 CMTM2Q8TAZ6 248 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 NRG4Q8WWG1 115 aa3.65□□□□□ -1.82
CXXC4-202ENST00000466963 CENPXA8MT69 81 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 H7C423 109 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 CCL25O15444 150 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 RAB4BP61018 213 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 TMEM183BQ1AE95 376 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 NRARPQ7Z6K4 114 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 TMEM183AQ8IXX5 376 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 OR5C1Q8NGR4 320 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 SFRP2Q96HF1 295 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 IL36BQ9NZH7 164 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
CXXC4-202ENST00000466963 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 CCDC160A6NGH7 325 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
CXXC4-202ENST00000466963 BAALCQ8WXS3 180 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 SMIM30A4D0T7 59 aa3.64□□□□□ -1.83
CXXC4-202ENST00000466963 C5orf51A6NDU8 294 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms