RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 SDF2L1Q9HCN8 221 aa10.3□□□□□ -0.76
DNMT3A-208ENST00000466601 C11orf21Q9P2W6 132 aa10.3□□□□□ -0.76
DNMT3A-208ENST00000466601 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 GNRH2O43555 120 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 TCL1AP56279 114 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 DAD1P61803 113 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 ZNF415Q09FC8 603 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
DNMT3A-208ENST00000466601 TMEM250H0YL14 139 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 SH2D1AO60880 128 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 TYMSP04818 313 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 ZNF674Q2M3X9 581 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 FAM162BQ5T6X4 162 aa10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 CEMP1Q6PRD7 247 aaPredicted RBP10.28□□□□□ -0.76
DNMT3A-208ENST00000466601 TRAV10A0A0B4J240 114 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 NUPR2A6NF83 97 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 GNG4P50150 75 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 RAB14P61106 215 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 IFITM2Q01629 132 aa10.27□□□□□ -0.77
DNMT3A-208ENST00000466601 DEFB131BA0A096LNP1 70 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 GAGE12BA1L429 117 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 NDUFS6O75380 124 aaKnown RBP10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 GAGE7O76087 117 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 IGLV2-8P01709 118 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 ORM1P02763 201 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 Q6ZTI0 123 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 PARLQ9H300 379 aa10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 KLK5Q9Y337 293 aaPredicted RBP10.26□□□□□ -0.77
DNMT3A-208ENST00000466601 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 TRGV1A0A0A0MS02 117 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 B4DEV8 164 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 SPINK4O60575 86 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 MGST1P10620 155 aaKnown RBP10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 SMIM12Q96EX1 92 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 SPXQ9BT56 116 aa10.25□□□□□ -0.77
DNMT3A-208ENST00000466601 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 M0R036 132 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 HTN3P15516 51 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 CEBPGP53567 150 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 PEA15Q15121 130 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 MRPL16Q9NX20 251 aaKnown RBP10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 STARD9Q9P2P6 4700 aa10.24□□□□□ -0.77
DNMT3A-208ENST00000466601 PGPEP1LA6NFU8 196 aa10.23□□□□□ -0.77
DNMT3A-208ENST00000466601 C9JCJ5 164 aa10.23□□□□□ -0.77
DNMT3A-208ENST00000466601 ATP5G1P05496 136 aa10.23□□□□□ -0.77
DNMT3A-208ENST00000466601 TRGV2A0A075B6R0 118 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 TMSB15BA0A087X1C1 80 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 M0R2P5 195 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 S100A4P26447 101 aaKnown RBP10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 ASIPP42127 132 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 OR5I1Q13606 314 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 CLLU1Q5K131 121 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 BIN3Q9NQY0 253 aa10.22□□□□□ -0.77
DNMT3A-208ENST00000466601 GRIFINA4D1Z8 144 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 IGLL5B9A064 214 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 C9JQL5 133 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 DNLZQ5SXM8 178 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 OCC1Q8TAD7 63 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 RASL10AQ92737 203 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 C18orf15Q96N68 181 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 SMDT1Q9H4I9 107 aa10.21□□□□□ -0.77
DNMT3A-208ENST00000466601 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 F5H768 121 aa10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 RPL19P84098 196 aaKnown RBP10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 SMIM7Q9BQ49 75 aa10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
DNMT3A-208ENST00000466601 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 H3BVH4 76 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 K7EN84 100 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 ARMS2P0C7Q2 107 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 LY96Q9Y6Y9 160 aa10.19□□□□□ -0.78
DNMT3A-208ENST00000466601 CXCL1P09341 107 aa10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 TCTAP57738 103 aa10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 PTH2Q96A98 100 aa10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 DYNC2H1Q8NCM8 4307 aaKnown RBP10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
DNMT3A-208ENST00000466601 P01737 135 aa10.17□□□□□ -0.78
DNMT3A-208ENST00000466601 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms