RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 RASL10AQ92737 203 aa11.77□□□□□ -0.53
TOM1-213ENST00000465529 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.53
TOM1-213ENST00000465529 DNAH5Q8TE73 4624 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 IGLV2-11P01706 119 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
TOM1-213ENST00000465529 TTC32Q5I0X7 151 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 SPXQ9BT56 116 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
TOM1-213ENST00000465529 PSG8Q9UQ74 426 aa11.76□□□□□ -0.53
TOM1-213ENST00000465529 SMLR1H3BR10 107 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 NXPH4O95158 308 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 CXorf1O96002 111 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 MBP02144 154 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 LYPD5Q6UWN5 251 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 ASB13Q8WXK3 278 aa11.75□□□□□ -0.53
TOM1-213ENST00000465529 HSPG2P98160 4391 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 K7EQD1 137 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 GCGP01275 180 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
TOM1-213ENST00000465529 LINC00315P59091 139 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 PRNTQ86SH4 94 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 LINC00479Q96M42 142 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 EPDR1Q9UM22 224 aa11.74□□□□□ -0.53
TOM1-213ENST00000465529 BORCS7-ASMTA0A0B4J1R7 106 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 TRAV34A0A0B4J273 112 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 A0A1W2PPQ1 181 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 C16orf90A8MZG2 172 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 M0R2P5 195 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 SIVA1O15304 175 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 GYPEP15421 78 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 UBE2G2P60604 165 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 FLI1Q01543 452 aaPredicted RBP11.73□□□□□ -0.53
TOM1-213ENST00000465529 SLAQ13239 276 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
TOM1-213ENST00000465529 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 TNFRSF18Q9Y5U5 241 aa11.73□□□□□ -0.53
TOM1-213ENST00000465529 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 ARPC5O15511 151 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 CYB561D1Q8N8Q1 229 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 CYTL1Q9NRR1 136 aa11.72□□□□□ -0.53
TOM1-213ENST00000465529 APOBP04114 4563 aaKnown RBP11.71□□□□□ -0.53
TOM1-213ENST00000465529 CTXND1A0A1B0GTU2 59 aa11.71□□□□□ -0.53
TOM1-213ENST00000465529 C9JCJ5 164 aa11.71□□□□□ -0.53
TOM1-213ENST00000465529 SRIP30626 198 aa11.71□□□□□ -0.53
TOM1-213ENST00000465529 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.53
TOM1-213ENST00000465529 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
TOM1-213ENST00000465529 K7EQM0 130 aa11.7□□□□□ -0.54
TOM1-213ENST00000465529 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
TOM1-213ENST00000465529 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
TOM1-213ENST00000465529 WFDC10BQ8IUB3 73 aa11.7□□□□□ -0.54
TOM1-213ENST00000465529 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
TOM1-213ENST00000465529 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
TOM1-213ENST00000465529 A0A1W2PRE2 83 aa11.69□□□□□ -0.54
TOM1-213ENST00000465529 PFN1P07737 140 aaKnown RBP11.69□□□□□ -0.54
TOM1-213ENST00000465529 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
TOM1-213ENST00000465529 PCNPQ8WW12 178 aaKnown RBP11.69□□□□□ -0.54
TOM1-213ENST00000465529 TAAR5O14804 337 aa11.68□□□□□ -0.54
TOM1-213ENST00000465529 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
TOM1-213ENST00000465529 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
TOM1-213ENST00000465529 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
TOM1-213ENST00000465529 KRTAP4-5Q9BYR2 181 aa11.68□□□□□ -0.54
TOM1-213ENST00000465529 ARL2-SNX15V9GYD0 113 aa11.68□□□□□ -0.54
TOM1-213ENST00000465529 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 FAM74A7A6NL05 159 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 PEX7O00628 323 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 IFNA7P01567 189 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 ORM1P02763 201 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
TOM1-213ENST00000465529 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.54
TOM1-213ENST00000465529 FHITP49789 147 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 ZNF876PQ49A33 203 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 ZFP69Q49AA0 526 aa11.67□□□□□ -0.54
TOM1-213ENST00000465529 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 MAP1LC3B2A6NCE7 125 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 RS1O15537 224 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 ZNF506Q5JVG8 444 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 CFAP126Q5VTH2 177 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 Q86TA4 180 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 MAP1LC3BQ9GZQ8 125 aa11.66□□□□□ -0.54
TOM1-213ENST00000465529 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.54
TOM1-213ENST00000465529 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
TOM1-213ENST00000465529 SLC25A29Q8N8R3 303 aa11.65□□□□□ -0.54
TOM1-213ENST00000465529 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
TOM1-213ENST00000465529 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.54
TOM1-213ENST00000465529 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
TOM1-213ENST00000465529 TXNDC17Q9BRA2 123 aa11.64□□□□□ -0.55
TOM1-213ENST00000465529 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
TOM1-213ENST00000465529 CRIP1P50238 77 aa11.63□□□□□ -0.55
TOM1-213ENST00000465529 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
TOM1-213ENST00000465529 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
TOM1-213ENST00000465529 KCNRGQ8N5I3 272 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms