RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SPINK13Q1W4C9 94 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 C16orf54Q6UWD8 224 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 C1orf122Q6ZSJ8 110 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
HPS4-208ENST00000464362 KAAG1Q9UBP8 84 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 KLK9Q9UKQ9 250 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 C3orf36Q3SXR2 165 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 ADAMTSL5Q6ZMM2 481 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 OOSP1A8MZH6 123 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 GDF5OSQ5U4N7 250 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 IGFL2Q6UWQ7 119 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
HPS4-208ENST00000464362 TRBV7-1A0A0A6YYK4 115 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 ANXA2RQ3ZCQ2 193 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 UBE2E2Q96LR5 201 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 TMEM14CQ9P0S9 112 aa7.13□□□□□ -1.27
HPS4-208ENST00000464362 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 I3L2K1 104 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 SLC25A16P16260 332 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 SPXQ9BT56 116 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 TP53TG3Q9ULZ0 132 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
HPS4-208ENST00000464362 LAMA1P25391 3075 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 PRAC2D3DTV9 90 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 IGLV2-8P01709 118 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 CGB3P0DN86 165 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 CGB7P0DN87 165 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 RNF114Q9Y508 228 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 CELSR3Q9NYQ7 3312 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 IGKV1D-37A0A075B6S9 117 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 IGHV2-70DA0A0C4DH43 119 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 GAGE2BQ13066 116 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
HPS4-208ENST00000464362 C10orf142B7Z368 130 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 IGLV2-23P01705 113 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 RBX1P62877 108 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 LOXL1Q08397 574 aaPredicted RBP7.11□□□□□ -1.27
HPS4-208ENST00000464362 PIP4P2Q8N4L2 257 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 FAM110DQ8TAY7 271 aaPredicted RBP7.11□□□□□ -1.27
HPS4-208ENST00000464362 CFHR4Q92496 578 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 H3BMG7 143 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 UBE2E1P51965 193 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 GNRH2O43555 120 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 PLNP26678 52 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 TMEM95Q3KNT9 176 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 SS18L2Q9UHA2 77 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 ACANP16112 2415 aa7.11□□□□□ -1.27
HPS4-208ENST00000464362 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 WIPF2Q8TF74 440 aaPredicted RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 PRSS22Q9GZN4 317 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 TRAV26-1A0A087WT03 109 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 SAP30O75446 220 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 SMIM20Q8N5G0 67 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 SRSF8Q9BRL6 282 aaKnown RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 TNRC6AQ8NDV7 1962 aaKnown RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 FASNP49327 2511 aaKnown RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 TEX22C9J3V5 150 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 IGLV1-47P01700 117 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 KLF5Q13887 457 aaPredicted RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 RNASE13Q5GAN3 156 aaKnown RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 DAZ1Q9NQZ3 744 aaKnown RBP7.1□□□□□ -1.27
HPS4-208ENST00000464362 C9orf118A6NHY6 69 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 CTSGP08311 255 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 HTN3P15516 51 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 DEFB131AP59861 70 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 CLUHP3Q96NS8 147 aa7.1□□□□□ -1.27
HPS4-208ENST00000464362 A8MWV9 139 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 VCYO14598 125 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 EIF4EBP1Q13541 118 aaPredicted RBP7.09□□□□□ -1.27
HPS4-208ENST00000464362 SVIPQ8NHG7 77 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 PRADC1Q9BSG0 188 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 ERG28Q9UKR5 140 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 FREM2Q5SZK8 3169 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 IGHV7-81A0A0B4J1V7 117 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 GAGE12HA6NDE8 117 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 ADARB2-AS1A8MUL3 147 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 Q8N8P6 123 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 C1orf159Q96HA4 380 aa7.09□□□□□ -1.27
HPS4-208ENST00000464362 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 DNAL4O96015 105 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 CRYBA4P53673 196 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 C10orf126Q8N4M7 172 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 MSRB2Q9Y3D2 182 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 WDFY3Q8IZQ1 3526 aa7.09□□□□□ -1.28
HPS4-208ENST00000464362 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 B5MCH6 92 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms