RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 C17orf77Q96MU5 243 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 F8WEM9 126 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
CHRNA4-202ENST00000463705 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.72
CHRNA4-202ENST00000463705 CCL24O00175 119 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 RMI2Q96E14 147 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 IGHV4-38-2P0DP08 117 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 HERVK_113P63121 156 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 TAL2Q16559 108 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 C5orf56Q8N8D9 126 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 F8VRH5 84 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 COX8AP10176 69 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
CHRNA4-202ENST00000463705 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 CRYGCP07315 174 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 ASPHD1Q5U4P2 390 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 Q8N9W7 124 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 WISP2O76076 250 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 CFHR4Q92496 578 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
CHRNA4-202ENST00000463705 WI2-2373I1.2A0A1W2PRP0 233 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 RITA1Q96K30 269 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 IGLV2-14P01704 120 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 CTSGP08311 255 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 C9orf66Q5T8R8 295 aa10.5□□□□□ -0.73
CHRNA4-202ENST00000463705 SIVA1O15304 175 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 GAGE6Q13070 117 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 K7EMT4 169 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 MSMPQ1L6U9 139 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 ODF3L1Q8IXM7 274 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 TEX48A0A1B0GUV7 120 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 TEX22C9J3V5 150 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 EREGO14944 169 aa10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 ZNF48Q96MX3 618 aaPredicted RBP10.49□□□□□ -0.73
CHRNA4-202ENST00000463705 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 ATRXP46100 2492 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 IGF2BP2-AS1Q96M15 143 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 TMEM131Q92545 1883 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 Q8NA96 180 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 PATE2Q6UY27 113 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 Q8N7P7 452 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 SIRPDQ9H106 197 aa10.48□□□□□ -0.73
CHRNA4-202ENST00000463705 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 KIAA1549LQ6ZVL6 1849 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 F6UB75 175 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 BUB3O43684 328 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 ZFAND6Q6FIF0 208 aa10.47□□□□□ -0.73
CHRNA4-202ENST00000463705 C9orf118A6NHY6 69 aa10.46□□□□□ -0.73
CHRNA4-202ENST00000463705 GNRH2O43555 120 aa10.46□□□□□ -0.73
CHRNA4-202ENST00000463705 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.73
CHRNA4-202ENST00000463705 C16orf74Q96GX8 76 aa10.46□□□□□ -0.73
CHRNA4-202ENST00000463705 ADAMTS9Q9P2N4 1935 aa10.46□□□□□ -0.73
CHRNA4-202ENST00000463705 FREM1Q5H8C1 2179 aa10.46□□□□□ -0.74
CHRNA4-202ENST00000463705 U3KQE9 123 aa10.46□□□□□ -0.74
CHRNA4-202ENST00000463705 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.74
CHRNA4-202ENST00000463705 IGLL1P15814 213 aa10.46□□□□□ -0.74
CHRNA4-202ENST00000463705 LINC00574Q9H8X3 128 aa10.46□□□□□ -0.74
CHRNA4-202ENST00000463705 C9JAW5 83 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 MORN5Q5VZ52 161 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 CDK2AP2O75956 126 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 ZFP36P26651 326 aaKnown RBP10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 SLURP1P55000 103 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 J3QQQ9 107 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 FSTL3O95633 263 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 PRB1P04280 392 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 FAM167A-AS1Q96KT0 104 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 DENND4AQ7Z401 1863 aa10.45□□□□□ -0.74
CHRNA4-202ENST00000463705 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 ZNF625Q96I27 306 aaPredicted RBP10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 NCOA6Q14686 2063 aaPredicted RBP10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 IGHG2P01859 326 aa10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 BLCAPP62952 87 aa10.44□□□□□ -0.74
CHRNA4-202ENST00000463705 COA6Q5JTJ3 125 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms