RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 OR10J4P0C629 311 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 ARL14EPLP0DKL9 152 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 C8orf88P0DMB2 117 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 PYYP10082 97 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 CRYBB3P26998 211 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 SYNJ2BPP57105 145 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 CCL20P78556 96 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 CD164Q04900 197 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 SMUG1Q53HV7 270 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 OR10J3Q5JRS4 329 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 C12orf54Q6X4T0 127 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 NDUFA11Q86Y39 141 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 OR1N2Q8NGR9 330 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 SFT2D1Q8WV19 159 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 SHANK2-AS3Q9BTD1 123 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 RABAC1Q9UI14 185 aa3.41□□□□□ -1.86
CSMD3-205ENST00000462254 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 KIR2DL5BA0A0G2JN68 375 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 KIR2DL5BA0A0G2JPC4 375 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 IGHV7-4-1A0A0J9YVY3 117 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 C2orf70A6NJV1 201 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 OR7C2O60412 319 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 ZP3P21754 424 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 NPPCP23582 126 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 GCHFRP30047 84 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 PFN2P35080 140 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
CSMD3-205ENST00000462254 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
CSMD3-205ENST00000462254 KHDC3LQ587J8 217 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 C9orf66Q5T8R8 295 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 IL34Q6ZMJ4 242 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 SMIM29Q86T20 159 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 KIR2DL5AQ8N109 375 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 KIR2DL5BQ8NHK3 375 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 FXYD5Q96DB9 178 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 METTL26Q96S19 204 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 DAZ1Q9NQZ3 744 aaKnown RBP3.4□□□□□ -1.87
CSMD3-205ENST00000462254 SPANXB1Q9NS25 103 aaPredicted RBP3.4□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF586Q9NXT0 402 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 XCL2Q9UBD3 114 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 SMPXQ9UHP9 88 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 SMAD5-AS1Q9Y6J3 95 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 ATRQ13535 2644 aa3.4□□□□□ -1.87
CSMD3-205ENST00000462254 LINC00862A6NCI5 91 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 H3BQ15 152 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 SLC17A3O00476 420 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 OVOL1O14753 267 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 CXorf1O96002 111 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 IGLC2P0DOY2 106 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 FOLR2P14207 255 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 CBLN1P23435 193 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 MYCNOSP40205 109 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 ATP5G3P48201 142 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 PSMB3P49720 205 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 APOC4P55056 127 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 TAS2R45P59539 299 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 RAB14P61106 215 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 UBE2L3P68036 154 aaKnown RBP3.39□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF506Q5JVG8 444 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 BPIFA4PQ86YQ2 179 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 BLNKQ8WV28 456 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM158Q8WZ71 300 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 PTH2Q96A98 100 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 PAXXQ9BUH6 204 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 RHPN1-AS1Q9BWJ2 59 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 MED9Q9NWA0 146 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 GNG13Q9P2W3 67 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 UFC1Q9Y3C8 167 aa3.39□□□□□ -1.87
CSMD3-205ENST00000462254 YTHDF2Q9Y5A9 579 aaKnown RBP3.39□□□□□ -1.87
CSMD3-205ENST00000462254 TRBV19A0A075B6N1 114 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 RBFOX3A6NFN3 312 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 GGTLC3B5MD39 225 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 SOCS3O14543 225 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 NBEAP1P0C6P0 100 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 PRB4P10163 310 aaPredicted RBP3.38□□□□□ -1.87
CSMD3-205ENST00000462254 HIST1H1EP10412 219 aaKnown RBP3.38□□□□□ -1.87
CSMD3-205ENST00000462254 BCL2P10415 239 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 RPL7P18124 248 aaKnown RBP3.38□□□□□ -1.87
CSMD3-205ENST00000462254 HLA-DMBP28068 263 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 GALR1P47211 349 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 GUK1Q16774 197 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 C1orf194Q5T5A4 169 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 REG3GQ6UW15 175 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 TCF24Q7RTU0 167 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 MRPL55Q7Z7F7 128 aaKnown RBP3.38□□□□□ -1.87
CSMD3-205ENST00000462254 S100A7AQ86SG5 101 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 COMMD7Q86VX2 200 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 OR8I2Q8N0Y5 310 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 MARC2Q969Z3 335 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 NARS2Q96I59 477 aaKnown RBP3.38□□□□□ -1.87
CSMD3-205ENST00000462254 GPR82Q96P67 336 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 C20orf144Q9BQM9 153 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 JPT2Q9H910 190 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 MANBALQ9NQG1 85 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM167BQ9NRX6 74 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms