RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ZNF705EA8MWA4 302 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 KRTAP29-1A8MX34 341 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 OR7C2O60412 319 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 RBMY1A1P0DJD3 496 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 RBMY1CP0DJD4 496 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 CDC34P49427 236 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 FHITP49789 147 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 PSG9Q00887 426 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 ERCC8Q13216 396 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 RBMY1FQ15415 496 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 TMEM41BQ5BJD5 291 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 EBLN2Q6P2I7 272 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 C1orf158Q8N1D5 194 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 ZNF680Q8NEM1 530 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 LRRC20Q8TCA0 184 aa5.73□□□□□ -1.49
ECHDC1-212ENST00000461239 TENM2Q9NT68 2774 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 M0R2Z0 102 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 MBP02144 154 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 AMBPP02760 352 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 PRM2P04554 102 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 ARL14EPLP0DKL9 152 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 CT45A10P0DMU9 189 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 RANP62826 216 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 UBE2L3P68036 154 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 HIST1H1AQ02539 215 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 ZNF876PQ49A33 203 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 KHDC3LQ587J8 217 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 ZNF705AQ6ZN79 300 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 Q8NAQ8 132 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 FAM19A4Q96LR4 140 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 RARRES2Q99969 163 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 Q9H3A6 140 aa5.72□□□□□ -1.49
ECHDC1-212ENST00000461239 LYSTQ99698 3801 aa5.71□□□□□ -1.49
ECHDC1-212ENST00000461239 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 IGKV2-40A0A087WW87 121 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 A0A0J9YWU9 116 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 KANTRA0A1W2PQU2 76 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 DEFB4AO15263 64 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 DUSP14O95147 198 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 IGKV2D-40P01614 121 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 SEC11BP0C7V7 166 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 GCHFRP30047 84 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 TAS2R45P59539 299 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 SPINK13Q1W4C9 94 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 Q6ZRP5 223 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 BAP18Q8IXM2 172 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 STOML3Q8TAV4 291 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 VGLL1Q99990 258 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 ZNF471Q9BX82 626 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 AGPAT4-IT1Q9H0P7 198 aa5.71□□□□□ -1.5
ECHDC1-212ENST00000461239 A0A087X002 238 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 CTXND1A0A1B0GTU2 59 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 PGPA6NDG6 321 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 FGF8P55075 233 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 NUTF2P61970 127 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 AKR1C8PQ5T2L2 129 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 Q6ZQT7 251 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 LYPD1Q8N2G4 141 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 ACTR3CQ9C0K3 210 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 PRELID1Q9Y255 219 aa5.7□□□□□ -1.5
ECHDC1-212ENST00000461239 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 KRBOX1C9JBD0 128 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 CXorf1O96002 111 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 SSTP61278 116 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 GNG5P63218 68 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 PRR9Q5T870 116 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 EIF4E3Q8N5X7 224 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 OR10J6PQ8NGY7 276 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 MUC7Q8TAX7 377 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 IGF2BP2-AS1Q96M15 143 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 OTORQ9NRC9 128 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 YTHDF2Q9Y5A9 579 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
ECHDC1-212ENST00000461239 KLLNB2CW77 178 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 TPT1P13693 172 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 MIFP14174 115 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 AZU1P20160 251 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 CDKN1BP46527 198 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 ZFAND2AQ8N6M9 145 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 Q8TAT8 98 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 MBD3L1Q8WWY6 194 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 TVP23CQ96ET8 276 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 ODF3Q96PU9 254 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 ZNF492Q9P255 531 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 CELA1Q9UNI1 258 aa5.68□□□□□ -1.5
ECHDC1-212ENST00000461239 IGHV3OR16-12A0A075B7B8 117 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 TRAV8-1A0A0A6YYK1 113 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 PLAC8L1A1L4L8 177 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 MAP1LC3B2A6NCE7 125 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 FAM74A7A6NL05 159 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms