RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PRELID1Q9Y255 219 aa11.88□□□□□ -0.51
TOP3A-202ENST00000461127 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 CRXO43186 299 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-202ENST00000461127 CNN1P51911 297 aaKnown RBP11.87□□□□□ -0.51
TOP3A-202ENST00000461127 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 ESRGQ1W209 222 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-202ENST00000461127 TMEM256Q8N2U0 113 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 C5orf17Q8NAS9 161 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 TREM1Q9NP99 234 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
TOP3A-202ENST00000461127 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 F6UZH7 168 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 PDE6DO43924 150 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 HTN1P15515 57 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 PSG3Q16557 428 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
TOP3A-202ENST00000461127 A0A0J9YY99 117 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 TAS2R60P59551 318 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 KRTAP10-1P60331 282 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 UQCC3Q6UW78 93 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 ZNF738Q8NE65 137 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 MRPL53Q96EL3 112 aaKnown RBP11.85□□□□□ -0.51
TOP3A-202ENST00000461127 SMDT1Q9H4I9 107 aa11.85□□□□□ -0.51
TOP3A-202ENST00000461127 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
TOP3A-202ENST00000461127 M0R3E3 92 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 CEBPGP53567 150 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 GNG5P63218 68 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 SRSF3P84103 164 aaKnown RBP11.84□□□□□ -0.51
TOP3A-202ENST00000461127 ZNF493Q6ZR52 646 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 CCDC28AQ8IWP9 274 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 RPUSD4Q96CM3 377 aaKnown RBP11.84□□□□□ -0.51
TOP3A-202ENST00000461127 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
TOP3A-202ENST00000461127 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 H3BNG1 76 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 K7EQM0 130 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 PEX7O00628 323 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 PPP1R14DQ9NXH3 145 aa11.83□□□□□ -0.52
TOP3A-202ENST00000461127 SCO2A0A1W2PP80 73 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 TCRAP04437 139 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
TOP3A-202ENST00000461127 AKR1C3P42330 323 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 SLC7A5P1Q8MH63 180 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 EIF4E3Q8N5X7 224 aaKnown RBP11.82□□□□□ -0.52
TOP3A-202ENST00000461127 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
TOP3A-202ENST00000461127 SERTM2A0A1B0GWG4 89 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 SIVA1O15304 175 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
TOP3A-202ENST00000461127 GOLT1AQ6ZVE7 132 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 TMEM263Q8WUH6 116 aaKnown RBP11.81□□□□□ -0.52
TOP3A-202ENST00000461127 C11orf52Q96A22 123 aa11.81□□□□□ -0.52
TOP3A-202ENST00000461127 C9JQL5 133 aa11.8□□□□□ -0.52
TOP3A-202ENST00000461127 PRB4P10163 310 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-202ENST00000461127 GCSHP23434 173 aa11.8□□□□□ -0.52
TOP3A-202ENST00000461127 UBE2G1P62253 170 aa11.8□□□□□ -0.52
TOP3A-202ENST00000461127 SERTAD4-AS1Q5TG53 156 aa11.8□□□□□ -0.52
TOP3A-202ENST00000461127 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
TOP3A-202ENST00000461127 A0A087WTM6 91 aa11.79□□□□□ -0.52
TOP3A-202ENST00000461127 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-202ENST00000461127 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
TOP3A-202ENST00000461127 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
TOP3A-202ENST00000461127 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
TOP3A-202ENST00000461127 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
TOP3A-202ENST00000461127 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
TOP3A-202ENST00000461127 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
TOP3A-202ENST00000461127 HOXA5P20719 270 aa11.78□□□□□ -0.52
TOP3A-202ENST00000461127 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
TOP3A-202ENST00000461127 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
TOP3A-202ENST00000461127 RBAKDNA6NC62 111 aa11.77□□□□□ -0.53
TOP3A-202ENST00000461127 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
TOP3A-202ENST00000461127 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.53
TOP3A-202ENST00000461127 RPL35P42766 123 aaKnown RBP11.77□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM78Q5T7P6 136 aa11.77□□□□□ -0.53
TOP3A-202ENST00000461127 LINC00612Q8N6U2 182 aa11.77□□□□□ -0.53
TOP3A-202ENST00000461127 OR8A1Q8NGG7 326 aa11.77□□□□□ -0.53
TOP3A-202ENST00000461127 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 GAGE12BA1L429 117 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM218A2RU14 115 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 H7BYZ3 331 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 GAGE7O76087 117 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 GAGE12FP0CL80 117 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 GAGE12GP0CL81 117 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 GAGE12IP0CL82 117 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 FLI1Q01543 452 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 SGK494Q96LW2 274 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 DERL1Q9BUN8 251 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 PARLQ9H300 379 aa11.76□□□□□ -0.53
TOP3A-202ENST00000461127 A0A096LPF7 62 aa11.75□□□□□ -0.53
TOP3A-202ENST00000461127 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms