RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 NUPR2A6NF83 97 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 ORM1P02763 201 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 GNG4P50150 75 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 CRIP1P50238 77 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 TCL1AP56279 114 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 PEA15Q15121 130 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 ZNF674Q2M3X9 581 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 SMIM12Q96EX1 92 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 TGP01266 2768 aa10.42□□□□□ -0.74
NCKIPSD-207ENST00000453349 TRAV10A0A0B4J240 114 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 SH2D1AO60880 128 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 TYMSP04818 313 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 CEBPGP53567 150 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 CEMP1Q6PRD7 247 aaPredicted RBP10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 Q6ZTC4 211 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 SPXQ9BT56 116 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 MDFICQ9P1T7 246 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 KLK5Q9Y337 293 aaPredicted RBP10.41□□□□□ -0.74
NCKIPSD-207ENST00000453349 DEFB131BA0A096LNP1 70 aa10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 B4DEV8 164 aa10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 MGST1P10620 155 aaKnown RBP10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 IFITM2Q01629 132 aa10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 PRR27Q6MZM9 219 aa10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 PARLQ9H300 379 aa10.4□□□□□ -0.74
NCKIPSD-207ENST00000453349 TRGV1A0A0A0MS02 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 IGHV3-16A0A0C4DH30 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 GAGE7O76087 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 SRP19P09132 144 aaKnown RBP10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 GAGE12FP0CL80 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 GAGE12GP0CL81 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 GAGE12IP0CL82 117 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 S100A4P26447 101 aaKnown RBP10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 SMDT1Q9H4I9 107 aa10.39□□□□□ -0.75
NCKIPSD-207ENST00000453349 IGKV3D-20A0A0C4DH25 116 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 KRBOX1C9JBD0 128 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 C9JCJ5 164 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 M0R036 132 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 SPINK4O60575 86 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 ASIPP42127 132 aa10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
NCKIPSD-207ENST00000453349 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 TRGV2A0A075B6R0 118 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 IGLV2-8P01709 118 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 ATP5G1P05496 136 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 HTN3P15516 51 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 OR5I1Q13606 314 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 LINC01559Q495D7 138 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 CLLU1Q5K131 121 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 Q6ZTI0 123 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
NCKIPSD-207ENST00000453349 TRBV20OR9-2A0A075B6H5 130 aa10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 PGPEP1LA6NFU8 196 aa10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 ZNF727A8MUV8 499 aa10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 M0R2P5 195 aa10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 MRPL16Q9NX20 251 aaKnown RBP10.36□□□□□ -0.75
NCKIPSD-207ENST00000453349 TMSB15BA0A087X1C1 80 aa10.35□□□□□ -0.75
NCKIPSD-207ENST00000453349 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
NCKIPSD-207ENST00000453349 IGLL5B9A064 214 aa10.35□□□□□ -0.75
NCKIPSD-207ENST00000453349 DNLZQ5SXM8 178 aa10.35□□□□□ -0.75
NCKIPSD-207ENST00000453349 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
NCKIPSD-207ENST00000453349 F5H768 121 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 SRSF3P84103 164 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 FAM74A3Q4VXF1 159 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 RASL10AQ92737 203 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 C18orf15Q96N68 181 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 LY96Q9Y6Y9 160 aa10.34□□□□□ -0.75
NCKIPSD-207ENST00000453349 P01737 135 aa10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 ARMS2P0C7Q2 107 aa10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 PTH2Q96A98 100 aa10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
NCKIPSD-207ENST00000453349 XKRY2A2RUG3 117 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 C19orf71A6NCJ1 209 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 C9JQL5 133 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 CXCL1P09341 107 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 TCTAP57738 103 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 RPL19P84098 196 aaKnown RBP10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 TMEM241Q24JQ0 296 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
NCKIPSD-207ENST00000453349 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
NCKIPSD-207ENST00000453349 H3BVH4 76 aa10.31□□□□□ -0.76
NCKIPSD-207ENST00000453349 K7EN84 100 aa10.31□□□□□ -0.76
NCKIPSD-207ENST00000453349 SOHLH1Q5JUK2 328 aa10.31□□□□□ -0.76
NCKIPSD-207ENST00000453349 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms