RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
SHMT2-203ENST00000449049 LOC102724200A0A096LPH7 203 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-203ENST00000449049 FABP4P15090 132 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-203ENST00000449049 FRZBQ92765 325 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 TMEM242Q9NWH2 141 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 AGRNO00468 2067 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 K7EN84 100 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-203ENST00000449049 AMBPP02760 352 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 GPX1P07203 203 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 FXYD7P58549 80 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 PDZD11Q5EBL8 140 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 FAM210BQ96KR6 192 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
SHMT2-203ENST00000449049 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
SHMT2-203ENST00000449049 PHOX2AO14813 284 aa10.29□□□□□ -0.76
SHMT2-203ENST00000449049 GCGP01275 180 aa10.29□□□□□ -0.76
SHMT2-203ENST00000449049 GIG44P09565 113 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-203ENST00000449049 LINC00614P0C842 121 aa10.29□□□□□ -0.76
SHMT2-203ENST00000449049 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-203ENST00000449049 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
SHMT2-203ENST00000449049 PACRGQ96M98 296 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-203ENST00000449049 KIR2DL5BA0A0G2JN68 375 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 KIR2DL5BA0A0G2JPC4 375 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 J3KRW8 73 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 PRB2P02812 416 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-203ENST00000449049 MGST1P10620 155 aaKnown RBP10.28□□□□□ -0.76
SHMT2-203ENST00000449049 CRIP1P50238 77 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 KIR2DL5AQ8N109 375 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 KIR2DL5BQ8NHK3 375 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 GOLT1BQ9Y3E0 138 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 C7orf71A4D174 169 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 K7EIL1 84 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 PNRC1Q12796 327 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-203ENST00000449049 GAGE1Q13065 139 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 Q6AWC8 147 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
SHMT2-203ENST00000449049 RNASE4P34096 147 aaKnown RBP10.27□□□□□ -0.77
SHMT2-203ENST00000449049 APOC4P55056 127 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-203ENST00000449049 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 C1QTNF4Q9BXJ3 329 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 DNAH3Q8TD57 4116 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.77
SHMT2-203ENST00000449049 OR5I1Q13606 314 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 ADIRFQ15847 76 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
SHMT2-203ENST00000449049 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
SHMT2-203ENST00000449049 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
SHMT2-203ENST00000449049 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-203ENST00000449049 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-203ENST00000449049 INSP01308 110 aa10.26□□□□□ -0.77
SHMT2-203ENST00000449049 PRR27Q6MZM9 219 aa10.26□□□□□ -0.77
SHMT2-203ENST00000449049 C20orf144Q9BQM9 153 aa10.26□□□□□ -0.77
SHMT2-203ENST00000449049 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 FABP5P3A8MUU1 101 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 DLEU1O43261 78 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 SH2D1AO60880 128 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 FRMD6-AS1P0C7T7 363 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 RBMY1A1P0DJD3 496 aaKnown RBP10.25□□□□□ -0.77
SHMT2-203ENST00000449049 RBMY1CP0DJD4 496 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 RBMY1FQ15415 496 aaKnown RBP10.25□□□□□ -0.77
SHMT2-203ENST00000449049 Q6ZQT7 251 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 CSNK1G2-AS1Q8NCQ2 148 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
SHMT2-203ENST00000449049 GZMBP10144 247 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-203ENST00000449049 FAM231DQ6ZW35 169 aa10.25□□□□□ -0.77
SHMT2-203ENST00000449049 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
SHMT2-203ENST00000449049 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
SHMT2-203ENST00000449049 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
SHMT2-203ENST00000449049 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
SHMT2-203ENST00000449049 EREGO14944 169 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 MAJINQ3KP22 176 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 IBA57Q5T440 356 aaKnown RBP10.23□□□□□ -0.77
SHMT2-203ENST00000449049 NUDT10Q8NFP7 164 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 NUDT11Q96G61 164 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 SFRP2Q96HF1 295 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 C11orf21Q9P2W6 132 aa10.23□□□□□ -0.77
SHMT2-203ENST00000449049 ERVFC1-1P60608 527 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 TMEM256Q8N2U0 113 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
SHMT2-203ENST00000449049 H7BYZ3 331 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 P01737 135 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 COA6Q5JTJ3 125 aaKnown RBP10.22□□□□□ -0.77
SHMT2-203ENST00000449049 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
SHMT2-203ENST00000449049 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
SHMT2-203ENST00000449049 ZNF705AQ6ZN79 300 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-203ENST00000449049 LINC00467Q9BRT7 94 aa10.21□□□□□ -0.77
SHMT2-203ENST00000449049 TDRG1Q3Y452 100 aa10.21□□□□□ -0.78
SHMT2-203ENST00000449049 Q6ZWC4 215 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms