RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PCNX2A6NKB5 2137 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 ZGRF1Q86YA3 2104 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 F5H768 121 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 DAD1P61803 113 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 C17orf77Q96MU5 243 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 AGPAT4-IT1Q9H0P7 198 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 MED13Q9UHV7 2174 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-204ENST00000448183 SPANXCQ9NY87 97 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 IGHV7-4-1A0A0J9YVY3 117 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 DYNAPQ8N1N2 210 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 MYLKQ15746 1914 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 WNK1Q9H4A3 2382 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 TRAV25A0A0B4J276 109 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 TEX48A0A1B0GUV7 120 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 EML6Q6ZMW3 1958 aa6.14□□□□□ -1.43
NEDD9-204ENST00000448183 PTPRQQ9UMZ3 2332 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 TRAV12-1A0A0B4J245 112 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 TINCRA0A1B0GVN0 87 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 C8orf31Q8N9H6 132 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 MRPL53Q96EL3 112 aaKnown RBP6.13□□□□□ -1.43
NEDD9-204ENST00000448183 SHISA9B4DS77 424 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 NUPR1O60356 82 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 LINC01545Q5VT33 79 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 IGFL3Q6UXB1 125 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 RBAKDNA6NC62 111 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 IGLL5B9A064 214 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 B5MCH6 92 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
NEDD9-204ENST00000448183 NACAE9PAV3 2078 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 RNASE13Q5GAN3 156 aaKnown RBP6.12□□□□□ -1.43
NEDD9-204ENST00000448183 SH2D6Q7Z4S9 175 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 CFHR4Q92496 578 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 LY6G6EA0A0G2JKS1 128 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 RNF223E7ERA6 249 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 FOXE3Q13461 319 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 PRR30Q53SZ7 412 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-204ENST00000448183 U3KQA8 63 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 ACYP1P07311 99 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 BAALC-AS2P0C853 105 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 PLXNA4Q9HCM2 1894 aa6.12□□□□□ -1.43
NEDD9-204ENST00000448183 TNCP24821 2201 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 GNRH2O43555 120 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 GATA1P15976 413 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-204ENST00000448183 TDRG1Q3Y452 100 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 DEFB121Q5J5C9 76 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 PLA2G2EQ9NZK7 142 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 H3BUA1 57 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 ELANEP08246 267 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 Q9H8V8 135 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 FOXI2Q6ZQN5 318 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 LINC00173Q6ZV60 143 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 C11orf53Q8IXP5 236 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 FAM208BQ5VWN6 2430 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 F6UB75 175 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 HOXD3P31249 432 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-204ENST00000448183 HELZP42694 1942 aaKnown RBP6.11□□□□□ -1.43
NEDD9-204ENST00000448183 TSC2P49815 1807 aa6.11□□□□□ -1.43
NEDD9-204ENST00000448183 GP9P14770 177 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 RBM3P98179 157 aaKnown RBP6.1□□□□□ -1.43
NEDD9-204ENST00000448183 FAM215AQ9Y5M1 114 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 PRSS47A8MTI9 375 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 K7ENP7 123 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 CRYGCP07315 174 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 UNQ6494/PRO21346Q6UXR6 183 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 RS1O15537 224 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 ANGP03950 147 aaKnown RBP6.1□□□□□ -1.43
NEDD9-204ENST00000448183 TMEM258P61165 79 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 HERV-K104P63124 156 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 MRAPQ8TCY5 172 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 C22orf46C9J442 243 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 LYPD6Q86Y78 171 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 SLC25A29Q8N8R3 303 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 MGAMO43451 1857 aa6.1□□□□□ -1.43
NEDD9-204ENST00000448183 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 RNASE8Q8TDE3 154 aaKnown RBP6.09□□□□□ -1.43
NEDD9-204ENST00000448183 FNDC1Q4ZHG4 1894 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-204ENST00000448183 IGKV1-17P01599 117 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 CR1LQ2VPA4 569 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 Q6ZSR3 168 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 CTSZQ9UBR2 303 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 IGF2BP2-AS1Q96M15 143 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 FGF23Q9GZV9 251 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-204ENST00000448183 HIGD1BQ9P298 99 aa6.09□□□□□ -1.43
NEDD9-204ENST00000448183 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.09□□□□□ -1.44
NEDD9-204ENST00000448183 IGKV2-29A2NJV5 120 aaPredicted RBP6.09□□□□□ -1.44
NEDD9-204ENST00000448183 A4D1N5 150 aa6.09□□□□□ -1.44
NEDD9-204ENST00000448183 J3QLI3 93 aa6.09□□□□□ -1.44
NEDD9-204ENST00000448183 PATE2Q6UY27 113 aa6.09□□□□□ -1.44
NEDD9-204ENST00000448183 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.44
NEDD9-204ENST00000448183 FXYD2P54710 66 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 MAPK1IP1LQ8NDC0 245 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 SPG11Q96JI7 2443 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 COL4A6Q14031 1691 aa6.08□□□□□ -1.44
NEDD9-204ENST00000448183 RPL39LQ96EH5 51 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms