RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ADGRB1O14514 1584 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 A0A1W2PRS3 328 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 J3QRE1 110 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 S100A8P05109 93 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 Q56UQ5 140 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.86□□□□□ -2.11
PMS1-216ENST00000447734 PLPP5Q8NEB5 264 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 SPTSSAQ969W0 71 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 SPANXDQ9BXN6 97 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 REG4Q9BYZ8 158 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 HEATR1Q9H583 2144 aaKnown RBP1.86□□□□□ -2.11
PMS1-216ENST00000447734 SERP1Q9Y6X1 66 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 MDC1Q14676 2089 aaKnown RBP1.86□□□□□ -2.11
PMS1-216ENST00000447734 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.86□□□□□ -2.11
PMS1-216ENST00000447734 PCDH15Q96QU1 1955 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 FREM1Q5H8C1 2179 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
PMS1-216ENST00000447734 WDR97A6NE52 1622 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 TRAV17A0A0B4J275 112 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 KLF7O75840 302 aaPredicted RBP1.85□□□□□ -2.11
PMS1-216ENST00000447734 SNCGO76070 127 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 IGHV3-33P01772 117 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 IL5P05113 134 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 RNASE3P12724 160 aaKnown RBP1.85□□□□□ -2.11
PMS1-216ENST00000447734 KRTAP13-3Q3SY46 172 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 GTF2H5Q6ZYL4 71 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 CDC42SE1Q9NRR8 79 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 TMEM242Q9NWH2 141 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 PLXNA4Q9HCM2 1894 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 BRWD1Q9NSI6 2320 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 LAMB2P55268 1798 aa1.85□□□□□ -2.11
PMS1-216ENST00000447734 FN1P02751 2386 aaKnown RBP1.84□□□□□ -2.11
PMS1-216ENST00000447734 ATG2AQ2TAZ0 1938 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 CEP192Q8TEP8 1941 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 CFTRP13569 1480 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 TRAV2A0A0B4J234 112 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 TRBV6-4A0A1B0GX49 114 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 MCRIP1C9JLW8 97 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 APOC4-APOC2K7ER74 178 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 NDUFB6O95139 128 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 TNFP01375 233 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 APOC2P02655 101 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 PIRTP0C851 137 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 PIPP12273 146 aaPredicted RBP1.84□□□□□ -2.11
PMS1-216ENST00000447734 POLR2JP52435 117 aaKnown RBP1.84□□□□□ -2.11
PMS1-216ENST00000447734 RHOHQ15669 191 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 MRPL54Q6P161 138 aaKnown RBP1.84□□□□□ -2.11
PMS1-216ENST00000447734 Q6ZRN7 208 aaPredicted RBP1.84□□□□□ -2.11
PMS1-216ENST00000447734 IER3IP1Q9Y5U9 82 aa1.84□□□□□ -2.11
PMS1-216ENST00000447734 MYOM2P54296 1465 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 KIDINS220Q9ULH0 1771 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 GEMIN2O14893 280 aaKnown RBP1.83□□□□□ -2.12
PMS1-216ENST00000447734 PRB4P10163 310 aaPredicted RBP1.83□□□□□ -2.12
PMS1-216ENST00000447734 IL7P13232 177 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 CATR1Q13166 79 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 SPANXN1Q5VSR9 72 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 UNQ5815/PRO19632Q6UWF5 114 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 C8orf59Q8N0T1 100 aaPredicted RBP1.83□□□□□ -2.12
PMS1-216ENST00000447734 TMEM106BQ9NUM4 274 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 TRPM7Q96QT4 1865 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 PTPRFP10586 1907 aa1.83□□□□□ -2.12
PMS1-216ENST00000447734 KTN1Q86UP2 1357 aaKnown RBP1.83□□□□□ -2.12
PMS1-216ENST00000447734 NINQ8N4C6 2090 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 A2ML1A8K2U0 1454 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 ICE1Q9Y2F5 2266 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 TRGV2A0A075B6R0 118 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 TMEM30CPA0ZSE6 113 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 TMEM218A2RU14 115 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 NUPR1O60356 82 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 Q6AWC8 147 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 PPDPFLQ8WWR9 84 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 LSM10Q969L4 123 aaKnown RBP1.82□□□□□ -2.12
PMS1-216ENST00000447734 MRPL57Q9BQC6 102 aaKnown RBP1.82□□□□□ -2.12
PMS1-216ENST00000447734 RPRMQ9NS64 109 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 NDUFA12Q9UI09 145 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 KIAA1549LQ6ZVL6 1849 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 CECR2Q9BXF3 1484 aa1.82□□□□□ -2.12
PMS1-216ENST00000447734 DOCK10Q96BY6 2186 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 TRAV30A0A087WSZ9 112 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 IGKCP01834 107 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 HSD52Q0P140 79 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 MPV17LQ2QL34 196 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 C9orf153Q5TBE3 101 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 LINC00299Q6ZSB3 139 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 SVBPQ8N300 66 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 ACBD7Q8N6N7 88 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 C15orf53Q8NAA6 179 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 EML5Q05BV3 1969 aa1.81□□□□□ -2.12
PMS1-216ENST00000447734 ANK1P16157 1881 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 CITO14578 2027 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 A6NIN4 97 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 CCL25O15444 150 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 DNAL4O96015 105 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 PPYP01298 95 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 SLC25A6P12236 298 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 IQCJQ1A5X6 159 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 RPL7L1Q6DKI1 246 aaKnown RBP1.8□□□□□ -2.12
PMS1-216ENST00000447734 CSAG1Q6PB30 78 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 LYPD5Q6UWN5 251 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms