RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CEBPZOSA8MTT3 80 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 SNRPCP09234 159 aaKnown RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 S100GP29377 79 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 RPS10P46783 165 aaKnown RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 KRTAP10-12P60413 245 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 MUC21Q5SSG8 566 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 LPCAT3Q6P1A2 487 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 ZNF546Q86UE3 836 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 MRPL53Q96EL3 112 aaKnown RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 C9orf85Q96MD7 179 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 SRRQ9GZT4 340 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 ANAPC10Q9UM13 185 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 HIGD1AQ9Y241 93 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 LSM2Q9Y333 95 aaKnown RBP1.85□□□□□ -2.11
PMS1-215ENST00000447232 PXMP4Q9Y6I8 212 aa1.85□□□□□ -2.11
PMS1-215ENST00000447232 IGHV3-73A0A0B4J1V6 119 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 FAM24AA6NFZ4 105 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 CTDSPLO15194 276 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 CFC1P0CG37 223 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 IGLC2P0DOY2 106 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 CALB2P22676 271 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 ATP5IP56385 69 aaPredicted RBP1.84□□□□□ -2.11
PMS1-215ENST00000447232 RND3P61587 244 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 KRTAP13-3Q3SY46 172 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 MPV17L2Q567V2 206 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 KCNIP4Q6PIL6 250 aa1.84□□□□□ -2.11
PMS1-215ENST00000447232 C5orf51A6NDU8 294 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 PRSS46E5RG02 174 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 H3BQ15 152 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 H3BTX0 84 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 HYPMO75409 117 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 PMP2P02689 132 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 ANGP03950 147 aaKnown RBP1.84□□□□□ -2.12
PMS1-215ENST00000447232 FABP5Q01469 135 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 PATE2Q6UY27 113 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 LINC00173Q6ZV60 143 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 LHFPL5Q8TAF8 219 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 KMT2DO14686 5537 aa1.84□□□□□ -2.12
PMS1-215ENST00000447232 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 TRBV7-9A0A0J9YWB2 115 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 MEIS3P1A6NDR6 274 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 M0R3E3 92 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 PDCD5O14737 125 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 CYCSP99999 105 aaKnown RBP1.83□□□□□ -2.12
PMS1-215ENST00000447232 TRAM1Q15629 374 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 ZNF876PQ49A33 203 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 Q6AWC8 147 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 PRR27Q6MZM9 219 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 C15orf56Q8N910 161 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 OR10G7Q8NGN6 311 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 TRAV18A0A075B6X5 111 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 A0A087X002 238 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 C3orf85A0A1B0GTC6 90 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 TNFAIP8O95379 198 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 ANXA7P20073 488 aaKnown RBP1.83□□□□□ -2.12
PMS1-215ENST00000447232 FGF8P55075 233 aaPredicted RBP1.83□□□□□ -2.12
PMS1-215ENST00000447232 ZNF266Q14584 549 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 SPHARQ15513 63 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 LAIR2Q6ISS4 152 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 BPIFA4PQ86YQ2 179 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 DTD1Q8TEA8 209 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 UFD1Q92890 307 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 YIPF6Q96EC8 236 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 MND1Q9BWT6 205 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 SLC39A9Q9NUM3 307 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 FKBP14Q9NWM8 211 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 RHBDL2Q9NX52 303 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 HSPB7Q9UBY9 170 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 CACFD1Q9UGQ2 172 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 RNF24Q9Y225 148 aa1.83□□□□□ -2.12
PMS1-215ENST00000447232 GNRH2O43555 120 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 CDS2O95674 445 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 OR5G3P0C626 314 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 LINC00869P0C866 280 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 GZMBP10144 247 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 RAB3BP20337 219 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 TAS2R46P59540 309 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 SURF2Q15527 256 aaPredicted RBP1.82□□□□□ -2.12
PMS1-215ENST00000447232 SS18Q15532 418 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 SP6Q3SY56 376 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 FAM159AQ6UWV7 190 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 CYP2G1PQ6ZSU1 146 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 AHSA2Q719I0 299 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 LINC00337Q8N6G1 96 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
PMS1-215ENST00000447232 ZNF486Q96H40 463 aaPredicted RBP1.82□□□□□ -2.12
PMS1-215ENST00000447232 MIXL1Q9H2W2 232 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 A0A0A0MQY5 61 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 A0A0A6YYH2 397 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 A6NJ64 397 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 TMEM262E9PQX1 116 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 IL5P05113 134 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 KRTAP2-3P0C7H8 128 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 PIGPP57054 158 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 CTAG1AP78358 180 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 ARL16Q0P5N6 197 aa1.82□□□□□ -2.12
PMS1-215ENST00000447232 UFSP1Q6NVU6 142 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms