RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PMCHP20382 165 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 RPS11P62280 158 aaKnown RBP eCLIP3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 RPS25P62851 125 aaKnown RBP3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 ZNF90Q03938 601 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 TMEM97Q5BJF2 176 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 ZFP2Q6ZN57 461 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 SEC22AQ96IW7 307 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 CYYR1Q96J86 154 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 CCDC90BQ9GZT6 254 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
BRAFP1-201ENST00000445336 A0A096LNI7 61 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 NFYAP23511 347 aaPredicted RBP3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 AMTP48728 403 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 AKR1D1P51857 326 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 SMIM15Q7Z3B0 74 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 OR1S1Q8NH92 325 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 GABARAPL1Q9H0R8 117 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 G3V2T6 193 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 GNGT2O14610 69 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 TNFSF12O43508 249 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 ZNF253O75346 499 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 SCO1O75880 301 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 KRASP01116 189 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 SFTA3P0C7M3 94 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 G6PCP35575 357 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 C5orf47Q569G3 176 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 PBDC1Q9BVG4 233 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 GABARAPL3Q9BY60 117 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 MED28Q9H204 178 aa3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 C14orf166Q9Y224 244 aaKnown RBP3.52□□□□□ -1.85
BRAFP1-201ENST00000445336 H3BRN7 92 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 PPYP01298 95 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 SLPIP03973 132 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 SPRR2EP22531 72 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 SPRR2BP35325 72 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 SPRR2AP35326 72 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 SMCO1Q147U7 214 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 Q8N3U1 123 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 OR10R2Q8NGX6 335 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 OR51H1Q8NH63 302 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 PYDC1Q8WXC3 89 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 TMEM147Q9BVK8 224 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 MAP1LC3CQ9BXW4 147 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 NDUFA12Q9UI09 145 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 ANXA10Q9UJ72 324 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 FLVCR2Q9UPI3 526 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 TGIF2-C20orf24A0A0A6YYL0 155 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 MUC21A0A0G2JKD1 596 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 LYZP61626 148 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 NMSQ5H8A3 153 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 ZNF331Q9NQX6 463 aaPredicted RBP3.51□□□□□ -1.85
BRAFP1-201ENST00000445336 WBP4O75554 376 aaKnown RBP3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 RAB4BP61018 213 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 RNF182Q8N6D2 247 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 SECTM1Q8WVN6 248 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 PLGRKTQ9HBL7 147 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 GSKIPQ9P0R6 139 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 PNMA8CA0A1B0GUJ8 204 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 RGS10O43665 173 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 DAND5Q8N907 189 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 GVQW2A0A096LPI5 108 aaPredicted RBP3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 SLC17A3O00476 420 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 HOXB5P09067 269 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 EIF5AP63241 154 aaKnown RBP3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 KLF9Q13886 244 aaPredicted RBP3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 ACOT7LQ6ZUV0 252 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 SNX29P2Q8IUI4 249 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 PRRT1Q99946 306 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 SHANK2-AS3Q9BTD1 123 aa3.5□□□□□ -1.85
BRAFP1-201ENST00000445336 DIRC3C9JPN6 131 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 H3BS24 57 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 PGLYRP1O75594 196 aaPredicted RBP3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 PLP1P60201 277 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 RAB2AP61019 212 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 RANP62826 216 aaKnown RBP3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 LPCAT3Q6P1A2 487 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 Q6ZQT7 251 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 Q9UF83 564 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 NUPR1O60356 82 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 NPSP0C0P6 89 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 DAPP51397 102 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 CEBPGP53567 150 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 CYCSP99999 105 aaKnown RBP3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 TRAM1Q15629 374 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 COX19Q49B96 90 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 YIPF6Q96EC8 236 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 PFDN5Q99471 154 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 ARL2BPQ9Y2Y0 163 aa3.49□□□□□ -1.85
BRAFP1-201ENST00000445336 A0A0G2JND7 137 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 ZFP92A6NM28 416 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 PRAC2D3DTV9 90 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 NBEAP1P0C6P0 100 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 PET100P0DJ07 73 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
BRAFP1-201ENST00000445336 FCAMRQ8WWV6 532 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms