RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CCSO14618 274 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 CIDEAO60543 219 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 OR10J4P0C629 311 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 RHOHQ15669 191 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 ATP6V1FQ16864 119 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 TMEM252Q8N6L7 170 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.9
HMGN1-208ENST00000443046 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 RS1O15537 224 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 TYMSP04818 313 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 CSN1S1P47710 185 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
HMGN1-208ENST00000443046 HBG1P69891 147 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 HBG2P69892 147 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 IL15RAQ13261 267 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 ACOT6Q3I5F7 207 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-208ENST00000443046 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 Q8N976 141 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 DAZAP1Q96EP5 407 aaKnown RBP9.39□□□□□ -0.91
HMGN1-208ENST00000443046 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
HMGN1-208ENST00000443046 RBFOX3A6NFN3 312 aa9.38□□□□□ -0.91
HMGN1-208ENST00000443046 IGLV2-11P01706 119 aa9.38□□□□□ -0.91
HMGN1-208ENST00000443046 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
HMGN1-208ENST00000443046 DAZ4Q86SG3 579 aaKnown RBP9.38□□□□□ -0.91
HMGN1-208ENST00000443046 DAZ3Q9NR90 486 aaKnown RBP9.38□□□□□ -0.91
HMGN1-208ENST00000443046 NAGKQ9UJ70 344 aa9.38□□□□□ -0.91
HMGN1-208ENST00000443046 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
HMGN1-208ENST00000443046 TOR2AQ5JU69 321 aa9.37□□□□□ -0.91
HMGN1-208ENST00000443046 STX12Q86Y82 276 aa9.37□□□□□ -0.91
HMGN1-208ENST00000443046 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 PVALBP20472 110 aaPredicted RBP9.36□□□□□ -0.91
HMGN1-208ENST00000443046 S100A5P33763 92 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 CNPY1Q3B7I2 92 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 ZNF876PQ49A33 203 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 C2orf50Q96LR7 162 aa9.36□□□□□ -0.91
HMGN1-208ENST00000443046 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 GGTLC3B5MD39 225 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 NOL3O60936 208 aaKnown RBP9.35□□□□□ -0.91
HMGN1-208ENST00000443046 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 PTH2Q96A98 100 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 KCNS1Q96KK3 526 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
HMGN1-208ENST00000443046 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
HMGN1-208ENST00000443046 IGHV3-73A0A0B4J1V6 119 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 MGST1P10620 155 aaKnown RBP9.34□□□□□ -0.91
HMGN1-208ENST00000443046 INPP1P49441 399 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
HMGN1-208ENST00000443046 SPANXN2Q5MJ10 180 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 TRIQKQ629K1 86 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 ASB13Q8WXK3 278 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 DNAJC30Q96LL9 226 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
HMGN1-208ENST00000443046 C5orf51A6NDU8 294 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 CENPXA8MT69 81 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 OR7C2O60412 319 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 NHLH2Q02577 135 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 RAB32Q13637 225 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 RMI2Q96E14 147 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 ATP5SQ99766 215 aa9.33□□□□□ -0.92
HMGN1-208ENST00000443046 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
HMGN1-208ENST00000443046 S100A10P60903 97 aa9.32□□□□□ -0.92
HMGN1-208ENST00000443046 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
HMGN1-208ENST00000443046 ATRAIDQ6UW56 229 aa9.32□□□□□ -0.92
HMGN1-208ENST00000443046 ARL6IP6Q8N6S5 226 aa9.32□□□□□ -0.92
HMGN1-208ENST00000443046 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
HMGN1-208ENST00000443046 TRAV8-1A0A0A6YYK1 113 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 F6UZH7 168 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 CYB561D1Q8N8Q1 229 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 OR5C1Q8NGR4 320 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 WDR61Q9GZS3 305 aaKnown RBP9.31□□□□□ -0.92
HMGN1-208ENST00000443046 TREM1Q9NP99 234 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 Q9UF83 564 aa9.31□□□□□ -0.92
HMGN1-208ENST00000443046 IGKV2D-24A0A075B6R9 120 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 A0A087WWC5 75 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 ZFP2Q6ZN57 461 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 NIT1Q86X76 327 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 HYLS1Q96M11 299 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 LINC00479Q96M42 142 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 SEC22CQ9BRL7 303 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 KCNIP2Q9NS61 270 aa9.3□□□□□ -0.92
HMGN1-208ENST00000443046 PGPA6NDG6 321 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 GAGE12JA6NER3 117 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 PLA2G10O15496 165 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 ZNF80P51504 273 aaPredicted RBP9.29□□□□□ -0.92
HMGN1-208ENST00000443046 GAGE1Q13065 139 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 GAGE4Q13068 117 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 GAGE5Q13069 117 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 GAGE13Q4V321 117 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 UFSP1Q6NVU6 142 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 Q6ZRU5 148 aa9.29□□□□□ -0.92
HMGN1-208ENST00000443046 TCRBP04435 133 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 361.3 ms