RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 DAZ2Q13117 558 aaKnown RBP11.36□□□□□ -0.59
USP39-205ENST00000442708 ZNF506Q5JVG8 444 aa11.36□□□□□ -0.59
USP39-205ENST00000442708 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
USP39-205ENST00000442708 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
USP39-205ENST00000442708 MLST8Q9BVC4 326 aa11.36□□□□□ -0.59
USP39-205ENST00000442708 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 PDE6DO43924 150 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 TYMSP04818 313 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 Q6ZTI0 123 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 BAGE2Q86Y30 109 aa11.35□□□□□ -0.59
USP39-205ENST00000442708 TRBV20OR9-2A0A075B6H5 130 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 TRAV10A0A0B4J240 114 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 IGKV3D-20A0A0C4DH25 116 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 SH2D1AO60880 128 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 GAGE7O76087 117 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 IGLV2-8P01709 118 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
USP39-205ENST00000442708 ZNF674Q2M3X9 581 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 TOR2AQ5JU69 321 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 ZNF575Q86XF7 245 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 MED9Q9NWA0 146 aa11.34□□□□□ -0.59
USP39-205ENST00000442708 SPINK4O60575 86 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 IFITM2Q01629 132 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 CENPWQ5EE01 88 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 FAM210AQ96ND0 272 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
USP39-205ENST00000442708 MRPL16Q9NX20 251 aaKnown RBP11.33□□□□□ -0.6
USP39-205ENST00000442708 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
USP39-205ENST00000442708 HTN3P15516 51 aa11.32□□□□□ -0.6
USP39-205ENST00000442708 FAM162BQ5T6X4 162 aa11.32□□□□□ -0.6
USP39-205ENST00000442708 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
USP39-205ENST00000442708 MUC4Q99102 2169 aa11.31□□□□□ -0.6
USP39-205ENST00000442708 TRGV1A0A0A0MS02 117 aa11.31□□□□□ -0.6
USP39-205ENST00000442708 PGPEP1LA6NFU8 196 aa11.31□□□□□ -0.6
USP39-205ENST00000442708 PLECQ15149 4684 aaKnown RBP11.3□□□□□ -0.6
USP39-205ENST00000442708 KRBOX1C9JBD0 128 aa11.3□□□□□ -0.6
USP39-205ENST00000442708 M0R036 132 aa11.3□□□□□ -0.6
USP39-205ENST00000442708 ORM1P02763 201 aa11.3□□□□□ -0.6
USP39-205ENST00000442708 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
USP39-205ENST00000442708 KLK5Q9Y337 293 aaPredicted RBP11.3□□□□□ -0.6
USP39-205ENST00000442708 B4DEV8 164 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 IGLL5B9A064 214 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 C9JQL5 133 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
USP39-205ENST00000442708 SRSF3P84103 164 aaKnown RBP11.29□□□□□ -0.6
USP39-205ENST00000442708 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 C9orf85Q96MD7 179 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 SPXQ9BT56 116 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 PARLQ9H300 379 aa11.29□□□□□ -0.6
USP39-205ENST00000442708 IGHV4-4A0A075B6R2 117 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 ATP5G1P05496 136 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
USP39-205ENST00000442708 GNG4P50150 75 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 LINC01559Q495D7 138 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 APLNQ9ULZ1 77 aa11.28□□□□□ -0.6
USP39-205ENST00000442708 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.61
USP39-205ENST00000442708 MGST1P10620 155 aaKnown RBP11.27□□□□□ -0.61
USP39-205ENST00000442708 HOXA5P20719 270 aa11.27□□□□□ -0.61
USP39-205ENST00000442708 RPL19P84098 196 aaKnown RBP11.27□□□□□ -0.61
USP39-205ENST00000442708 RASL10AQ92737 203 aa11.27□□□□□ -0.61
USP39-205ENST00000442708 C18orf15Q96N68 181 aa11.27□□□□□ -0.61
USP39-205ENST00000442708 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
USP39-205ENST00000442708 LYSTQ99698 3801 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 F5H768 121 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 K7EN84 100 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 M0R2P5 195 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 CEBPGP53567 150 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 OR5I1Q13606 314 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 TMEM88Q6PEY1 159 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 POM121L12Q8N7R1 296 aa11.26□□□□□ -0.61
USP39-205ENST00000442708 C19orf71A6NCJ1 209 aa11.25□□□□□ -0.61
USP39-205ENST00000442708 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
USP39-205ENST00000442708 IGHV3-53P01767 116 aa11.25□□□□□ -0.61
USP39-205ENST00000442708 ASIPP42127 132 aa11.25□□□□□ -0.61
USP39-205ENST00000442708 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
USP39-205ENST00000442708 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
USP39-205ENST00000442708 C9JCJ5 164 aa11.24□□□□□ -0.61
USP39-205ENST00000442708 H3BVH4 76 aa11.24□□□□□ -0.61
USP39-205ENST00000442708 SFTA3P0C7M3 94 aa11.23□□□□□ -0.61
USP39-205ENST00000442708 ARMS2P0C7Q2 107 aa11.23□□□□□ -0.61
USP39-205ENST00000442708 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
USP39-205ENST00000442708 ZNF479Q96JC4 524 aa11.23□□□□□ -0.61
USP39-205ENST00000442708 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
USP39-205ENST00000442708 ALMS1Q8TCU4 4167 aa11.22□□□□□ -0.61
USP39-205ENST00000442708 LCE6AA0A183 80 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms