RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 PSMB8P28062 276 aa11.91□□□□□ -0.5
RBFOX1-205ENST00000436368 RNASE4P34096 147 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-205ENST00000436368 SNRPD3P62318 126 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-205ENST00000436368 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
RBFOX1-205ENST00000436368 HIVEP3Q5T1R4 2406 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 ODF1Q14990 250 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 VAMP3Q15836 100 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 PRR9Q5T870 116 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 ZMAT4Q9H898 229 aa11.9□□□□□ -0.5
RBFOX1-205ENST00000436368 NXPH4O95158 308 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 ELANEP08246 267 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 FGF6P10767 208 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 ANXA2RQ3ZCQ2 193 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 C2orf91Q6ZV80 131 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 FOXC2Q99958 501 aa11.89□□□□□ -0.51
RBFOX1-205ENST00000436368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-205ENST00000436368 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-205ENST00000436368 DEFB112Q30KQ8 113 aa11.88□□□□□ -0.51
RBFOX1-205ENST00000436368 HIGD1BQ9P298 99 aa11.88□□□□□ -0.51
RBFOX1-205ENST00000436368 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
RBFOX1-205ENST00000436368 COL6A6A6NMZ7 2263 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 KLLNB2CW77 178 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 LGALS9O00182 355 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 DUSP14O95147 198 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 NMUP48645 174 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 FXYD7P58549 80 aa11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 RPL32P62910 135 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
RBFOX1-205ENST00000436368 J3KRW8 73 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 TAX1BP3O14907 124 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 ZZEF1O43149 2961 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 OR4C5Q8NGB2 326 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 CACNA1AO00555 2505 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 A0A087WX48 190 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 TGFAP01135 160 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 MGPP08493 103 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
RBFOX1-205ENST00000436368 SMG1Q96Q15 3661 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 NBASA2RRP1 2371 aa11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 C7orf71A4D174 169 aa11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 AVPP01185 164 aa11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 POM121L12Q8N7R1 296 aa11.85□□□□□ -0.51
RBFOX1-205ENST00000436368 TRAV26-2A0A0B4J265 109 aa11.84□□□□□ -0.51
RBFOX1-205ENST00000436368 H7C1H1 209 aa11.84□□□□□ -0.51
RBFOX1-205ENST00000436368 GAS8-AS1O95177 125 aa11.84□□□□□ -0.51
RBFOX1-205ENST00000436368 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
RBFOX1-205ENST00000436368 DCANP1Q8TF63 244 aa11.84□□□□□ -0.51
RBFOX1-205ENST00000436368 IGKV3-7A0A075B6H7 116 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 H3BRM9 83 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 Q6ZS46 218 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 TOMM6Q96B49 74 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 SCGB3A1Q96QR1 104 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 LRBAP50851 2863 aa11.83□□□□□ -0.52
RBFOX1-205ENST00000436368 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 A0A096LNT2 108 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 FSHBP01225 129 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 LCNL1Q6ZST4 164 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 C14orf178Q8N769 122 aaPredicted RBP11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 UBE2E2Q96LR5 201 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 WNK2Q9Y3S1 2297 aa11.82□□□□□ -0.52
RBFOX1-205ENST00000436368 CBY3A6NI87 242 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 F6UB75 175 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 F8VRH5 84 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 CCL25O15444 150 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 RNASE3P12724 160 aaKnown RBP11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 Q6YL49 198 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 RASL10AQ92737 203 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 TP73-AS1Q9UF72 201 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 NCOR2Q9Y618 2525 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 IGHV4OR15-8A0A075B7B6 117 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 A0A087WW49 117 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 K7EQG2 157 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 RNF152Q8N8N0 203 aa11.81□□□□□ -0.52
RBFOX1-205ENST00000436368 A0A0J9YX75 114 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 TAL2Q16559 108 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 PAPPA-AS1Q5QFB9 102 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 ADAMTSL5Q6ZMM2 481 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
RBFOX1-205ENST00000436368 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 TRAV2A0A0B4J234 112 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 K7EP13 123 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 CD7P09564 240 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 FOXI2Q6ZQN5 318 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 Q6ZQT7 251 aa11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-205ENST00000436368 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms