RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 PFN1P07737 140 aaKnown RBP10.39□□□□□ -0.75
SGCE-204ENST00000428696 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 ZNF674Q2M3X9 581 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 TOR2AQ5JU69 321 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 PRR27Q6MZM9 219 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 ZC2HC1AQ96GY0 325 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 LINC00467Q9BRT7 94 aa10.39□□□□□ -0.75
SGCE-204ENST00000428696 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
SGCE-204ENST00000428696 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 DEFB131BA0A096LNP1 70 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 TRGV1A0A0A0MS02 117 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 NUPR2A6NF83 97 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 IGLL5B9A064 214 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 M0R036 132 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 LTAP01374 205 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 MGST1P10620 155 aaKnown RBP10.38□□□□□ -0.75
SGCE-204ENST00000428696 RAB14P61106 215 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
SGCE-204ENST00000428696 TRGV2A0A075B6R0 118 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 TMSB15BA0A087X1C1 80 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 SH2D1AO60880 128 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 LYPD6BQ8NI32 183 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
SGCE-204ENST00000428696 B4DEV8 164 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
SGCE-204ENST00000428696 GNG4P50150 75 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 CRIP1P50238 77 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 Q6ZTI0 123 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 C11orf72Q8NBR9 251 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 C11orf52Q96A22 123 aa10.36□□□□□ -0.75
SGCE-204ENST00000428696 MRPL16Q9NX20 251 aaKnown RBP10.36□□□□□ -0.75
SGCE-204ENST00000428696 F5H768 121 aa10.35□□□□□ -0.75
SGCE-204ENST00000428696 TYMSP04818 313 aa10.35□□□□□ -0.75
SGCE-204ENST00000428696 TCL1AP56279 114 aa10.35□□□□□ -0.75
SGCE-204ENST00000428696 DAZ2Q13117 558 aaKnown RBP10.35□□□□□ -0.75
SGCE-204ENST00000428696 OR5I1Q13606 314 aa10.35□□□□□ -0.75
SGCE-204ENST00000428696 ZNF506Q5JVG8 444 aa10.35□□□□□ -0.75
SGCE-204ENST00000428696 IBA57Q5T440 356 aaKnown RBP10.35□□□□□ -0.75
SGCE-204ENST00000428696 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
SGCE-204ENST00000428696 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
SGCE-204ENST00000428696 TDRG1Q3Y452 100 aa10.34□□□□□ -0.75
SGCE-204ENST00000428696 DAZAP1Q96EP5 407 aaKnown RBP10.34□□□□□ -0.75
SGCE-204ENST00000428696 FAM210AQ96ND0 272 aa10.34□□□□□ -0.75
SGCE-204ENST00000428696 DNAH7Q8WXX0 4024 aa10.34□□□□□ -0.75
SGCE-204ENST00000428696 PGPEP1LA6NFU8 196 aa10.33□□□□□ -0.76
SGCE-204ENST00000428696 C9JCJ5 164 aa10.33□□□□□ -0.76
SGCE-204ENST00000428696 ATP5G1P05496 136 aa10.33□□□□□ -0.76
SGCE-204ENST00000428696 IGKV3D-20A0A0C4DH25 116 aa10.33□□□□□ -0.76
SGCE-204ENST00000428696 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
SGCE-204ENST00000428696 KRBOX1C9JBD0 128 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 SPINK4O60575 86 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 ASIPP42127 132 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 PEA15Q15121 130 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 SPXQ9BT56 116 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 PARLQ9H300 379 aa10.32□□□□□ -0.76
SGCE-204ENST00000428696 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
SGCE-204ENST00000428696 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
SGCE-204ENST00000428696 SSTP61278 116 aa10.31□□□□□ -0.76
SGCE-204ENST00000428696 RPL19P84098 196 aaKnown RBP10.31□□□□□ -0.76
SGCE-204ENST00000428696 ZNF876PQ49A33 203 aa10.31□□□□□ -0.76
SGCE-204ENST00000428696 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
SGCE-204ENST00000428696 M0R2P5 195 aa10.3□□□□□ -0.76
SGCE-204ENST00000428696 TRBV20OR9-2A0A075B6H5 130 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 A0A0J9YY99 117 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 ZNF727A8MUV8 499 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 H3BVH4 76 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
SGCE-204ENST00000428696 SRSF3P84103 164 aaKnown RBP10.29□□□□□ -0.76
SGCE-204ENST00000428696 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 OCC1Q8TAD7 63 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 SMIM7Q9BQ49 75 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
SGCE-204ENST00000428696 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
SGCE-204ENST00000428696 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
SGCE-204ENST00000428696 OR2D3Q8NGH3 330 aa10.28□□□□□ -0.76
SGCE-204ENST00000428696 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
SGCE-204ENST00000428696 BIN3Q9NQY0 253 aa10.28□□□□□ -0.76
SGCE-204ENST00000428696 TRGV4A0A0C4DH28 118 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 NUDT3O95989 172 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 P01737 135 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 SFTA3P0C7M3 94 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 RNASE3P12724 160 aaKnown RBP10.27□□□□□ -0.77
SGCE-204ENST00000428696 IFITM2Q01629 132 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 OR4C5Q8NGB2 326 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 CSMD3Q7Z407 3707 aa10.27□□□□□ -0.77
SGCE-204ENST00000428696 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 MUC21A0A0G2JKD1 596 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 MUC21A0A140T8X8 626 aa10.26□□□□□ -0.77
SGCE-204ENST00000428696 C9JQL5 133 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms