RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 DPPA3Q6W0C5 159 aa10.89□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TREM1Q9NP99 234 aa10.89□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TRGV11A0A075B6L2 103 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 K7EQD1 137 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 PAX4O43316 350 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 SOHLH1Q5JUK2 328 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 CMTM2Q8TAZ6 248 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 C9orf85Q96MD7 179 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 SPXQ9BT56 116 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 LOC100131303A0A0U1RQF7 123 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 SERTM2A0A1B0GWG4 89 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 CXorf1O96002 111 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 RNASE3P12724 160 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 LINC00315P59091 139 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 KRTAP10-2P60368 255 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 FAM74A1Q5RGS3 127 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 LYPD5Q6UWN5 251 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 FAM159AQ6UWV7 190 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 LINC00479Q96M42 142 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 EPDR1Q9UM22 224 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 PSG8Q9UQ74 426 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 HHLA3Q9XRX5 114 aa10.87□□□□□ -0.67
HLA-DQB2-230ENST00000427449 NXPH4O95158 308 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 MBP02144 154 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 SUMO1P63165 101 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 RGS21Q2M5E4 152 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 CYB561D1Q8N8Q1 229 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 OR11H4Q8NGC9 324 aa10.86□□□□□ -0.67
HLA-DQB2-230ENST00000427449 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 A0A1W2PRE2 83 aa10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 M0R2P5 195 aa10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 GATA1P15976 413 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 FLI1Q01543 452 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 ACTR3CQ9C0K3 210 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TMEM167BQ9NRX6 74 aa10.85□□□□□ -0.67
HLA-DQB2-230ENST00000427449 IGKV3D-20A0A0C4DH25 116 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 GCGP01275 180 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 PFN1P07737 140 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 WFDC10BQ8IUB3 73 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
HLA-DQB2-230ENST00000427449 TRAV34A0A0B4J273 112 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SIVA1O15304 175 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ARPC5O15511 151 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 FHITP49789 147 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 CRIP1P50238 77 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 FGF8P55075 233 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SLAQ13239 276 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 Q86TA4 180 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 INO80EQ8NBZ0 244 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
HLA-DQB2-230ENST00000427449 PGPEP1LA6NFU8 196 aa10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 GYPEP15421 78 aa10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 MRPL23Q16540 153 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 PTH2Q96A98 100 aa10.82□□□□□ -0.68
HLA-DQB2-230ENST00000427449 TRGV4A0A0C4DH28 118 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 RS1O15537 224 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ZNF345Q14585 488 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ZNF506Q5JVG8 444 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 UFSP1Q6NVU6 142 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 PRNTQ86SH4 94 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 KCNRGQ8N5I3 272 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 KCNS1Q96KK3 526 aa10.81□□□□□ -0.68
HLA-DQB2-230ENST00000427449 BORCS7-ASMTA0A0B4J1R7 106 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 PEX7O00628 323 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 DNAH10OSP0CZ25 163 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 UBE2G2P60604 165 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
HLA-DQB2-230ENST00000427449 MAP1LC3B2A6NCE7 125 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 TIRAPP58753 221 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SMUG1Q53HV7 270 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 Q6ZSN1 163 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 OR4C5Q8NGB2 326 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 MAP1LC3BQ9GZQ8 125 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 Q9UF83 564 aa10.79□□□□□ -0.68
HLA-DQB2-230ENST00000427449 FBLL1A6NHQ2 334 aaKnown RBP10.78□□□□□ -0.68
HLA-DQB2-230ENST00000427449 TAAR5O14804 337 aa10.78□□□□□ -0.68
HLA-DQB2-230ENST00000427449 ORM1P02763 201 aa10.78□□□□□ -0.68
HLA-DQB2-230ENST00000427449 DNLZQ5SXM8 178 aa10.78□□□□□ -0.68
HLA-DQB2-230ENST00000427449 NDFIP1Q9BT67 221 aa10.78□□□□□ -0.68
HLA-DQB2-230ENST00000427449 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
HLA-DQB2-230ENST00000427449 SRIP30626 198 aa10.77□□□□□ -0.69
HLA-DQB2-230ENST00000427449 ZNF876PQ49A33 203 aa10.77□□□□□ -0.69
HLA-DQB2-230ENST00000427449 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms