RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 C9orf139Q6ZV77 190 aa13.23□□□□□ -0.29
RARA-206ENST00000425707 TRAV26-2A0A0B4J265 109 aa13.22□□□□□ -0.29
RARA-206ENST00000425707 SUMO2P61956 95 aaKnown RBP13.22□□□□□ -0.29
RARA-206ENST00000425707 IGHV3OR16-8A0A075B7F1 116 aa13.22□□□□□ -0.29
RARA-206ENST00000425707 EFNA4P52798 201 aa13.22□□□□□ -0.29
RARA-206ENST00000425707 SCGB3A1Q96QR1 104 aa13.22□□□□□ -0.29
RARA-206ENST00000425707 NDUFS8O00217 210 aa13.21□□□□□ -0.29
RARA-206ENST00000425707 ATP6V0E1O15342 81 aa13.21□□□□□ -0.29
RARA-206ENST00000425707 ATP6V0E2Q8NHE4 81 aa13.21□□□□□ -0.29
RARA-206ENST00000425707 ITLN2Q8WWU7 325 aaPredicted RBP13.21□□□□□ -0.29
RARA-206ENST00000425707 LINC00477Q96M19 166 aa13.21□□□□□ -0.29
RARA-206ENST00000425707 IGHV3-35A0A0C4DH35 117 aa13.21□□□□□ -0.29
RARA-206ENST00000425707 TMEM238LA0A1B0GVL6 79 aa13.21□□□□□ -0.3
RARA-206ENST00000425707 A6NJY4 79 aa13.21□□□□□ -0.3
RARA-206ENST00000425707 H3BMG7 143 aa13.21□□□□□ -0.3
RARA-206ENST00000425707 UBE2E1P51965 193 aa13.21□□□□□ -0.3
RARA-206ENST00000425707 DPH3P1Q9H4G8 78 aa13.21□□□□□ -0.3
RARA-206ENST00000425707 TSSC4Q9Y5U2 329 aaPredicted RBP13.21□□□□□ -0.3
RARA-206ENST00000425707 CLEC19AQ6UXS0 136 aa13.2□□□□□ -0.3
RARA-206ENST00000425707 SPTA1P02549 2419 aa13.2□□□□□ -0.3
RARA-206ENST00000425707 ECSCRQ19T08 205 aa13.2□□□□□ -0.3
RARA-206ENST00000425707 POM121L12Q8N7R1 296 aa13.2□□□□□ -0.3
RARA-206ENST00000425707 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
RARA-206ENST00000425707 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
RARA-206ENST00000425707 RASL10AQ92737 203 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 AJUBAQ96IF1 538 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
RARA-206ENST00000425707 KALRNO60229 2985 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 H3BVH4 76 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 LY6HO94772 140 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 LGALS1P09382 135 aaKnown RBP13.19□□□□□ -0.3
RARA-206ENST00000425707 GLMPQ8WWB7 406 aa13.19□□□□□ -0.3
RARA-206ENST00000425707 TRAV21A0A0B4J279 112 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 RAXQ9Y2V3 346 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 AGRNO00468 2067 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 MORN3Q6PF18 240 aaPredicted RBP13.18□□□□□ -0.3
RARA-206ENST00000425707 ARHGAP32A7KAX9 2087 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 OVOL1O14753 267 aa13.18□□□□□ -0.3
RARA-206ENST00000425707 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 BAALCQ8WXS3 180 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 ETDBQ3ZM63 59 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 APRG1Q8IVJ8 170 aa13.17□□□□□ -0.3
RARA-206ENST00000425707 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 ZFP36P26651 326 aaKnown RBP13.16□□□□□ -0.3
RARA-206ENST00000425707 GRNP28799 593 aaKnown RBP13.16□□□□□ -0.3
RARA-206ENST00000425707 UBE2D1P51668 147 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
RARA-206ENST00000425707 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 COX6B1P14854 86 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 PRR9Q5T870 116 aa13.16□□□□□ -0.3
RARA-206ENST00000425707 ASIPP42127 132 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 C2orf66Q6UXQ4 117 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 SPOCK3Q9BQ16 436 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 PRADC1Q9BSG0 188 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 ATRXP46100 2492 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 A0A1B0GV72 72 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 NXPH4O95158 308 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 C19orf54Q5BKX5 351 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 LYRM7Q5U5X0 104 aa13.15□□□□□ -0.3
RARA-206ENST00000425707 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
RARA-206ENST00000425707 SH2D6Q7Z4S9 175 aa13.14□□□□□ -0.31
RARA-206ENST00000425707 OR10J6PQ8NGY7 276 aa13.14□□□□□ -0.31
RARA-206ENST00000425707 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 K7ENP7 123 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 CFAP126Q5VTH2 177 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 BSNQ9UPA5 3926 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 SOCS3O14543 225 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 AMTNQ6UX39 209 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 ADGRG4Q8IZF6 3080 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 G3V318 75 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 Q6ZQT7 251 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 C5orf56Q8N8D9 126 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 PGPEP1Q9NXJ5 209 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
RARA-206ENST00000425707 ACACBO00763 2458 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 A0A087WW49 117 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 BRI3O95415 125 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 NBASA2RRP1 2371 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 IGHV3OR16-13A0A075B7E8 117 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 IGHV3-74A0A0B4J1X5 117 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 ZNF815PA8K554 130 aa13.12□□□□□ -0.31
RARA-206ENST00000425707 TLN1Q9Y490 2541 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms