RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 MSRB2Q9Y3D2 182 aa9.73□□□□□ -0.85
CTCFL-204ENST00000422869 IGHV3-66A0A0C4DH42 116 aa9.73□□□□□ -0.85
CTCFL-204ENST00000422869 FHL3Q13643 280 aa9.73□□□□□ -0.85
CTCFL-204ENST00000422869 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
CTCFL-204ENST00000422869 MRAP2Q96G30 205 aa9.73□□□□□ -0.85
CTCFL-204ENST00000422869 ODF3BA8MYP8 253 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 KLK15Q9H2R5 256 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 EP300Q09472 2414 aaPredicted RBP9.72□□□□□ -0.85
CTCFL-204ENST00000422869 ATP6V0E2Q8NHE4 81 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 ASH1LQ9NR48 2969 aaKnown RBP9.72□□□□□ -0.85
CTCFL-204ENST00000422869 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
CTCFL-204ENST00000422869 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 A4D1N5 150 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
CTCFL-204ENST00000422869 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.85
CTCFL-204ENST00000422869 SCGB2A1O75556 95 aa9.71□□□□□ -0.85
CTCFL-204ENST00000422869 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.85
CTCFL-204ENST00000422869 SCGB3A1Q96QR1 104 aa9.71□□□□□ -0.85
CTCFL-204ENST00000422869 SLC50A1Q9BRV3 221 aa9.71□□□□□ -0.85
CTCFL-204ENST00000422869 Q8N6K4 173 aa9.71□□□□□ -0.86
CTCFL-204ENST00000422869 DLX4Q92988 240 aaPredicted RBP9.71□□□□□ -0.86
CTCFL-204ENST00000422869 PRADC1Q9BSG0 188 aa9.71□□□□□ -0.86
CTCFL-204ENST00000422869 RAXQ9Y2V3 346 aa9.71□□□□□ -0.86
CTCFL-204ENST00000422869 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 H3BVH4 76 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 UBE2D1P51668 147 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 IGHV7-81A0A0B4J1V7 117 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 TSPAN13O95857 204 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 BAALCQ8WXS3 180 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 PLEKHB2Q96CS7 222 aa9.7□□□□□ -0.86
CTCFL-204ENST00000422869 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
CTCFL-204ENST00000422869 COX6B1P14854 86 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 SLC25A16P16260 332 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 C15orf32Q32M92 178 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 SFTA2Q6UW10 78 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 ZFP2Q6ZN57 461 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 RASL10AQ92737 203 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 OTOGLQ3ZCN5 2332 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 CACNA1HO95180 2353 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 PRSS29PA6NIE9 313 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 SUMO2P61956 95 aaKnown RBP9.69□□□□□ -0.86
CTCFL-204ENST00000422869 PRR9Q5T870 116 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 GLMPQ8WWB7 406 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 YAE1D1Q9NRH1 226 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 ZNF815PA8K554 130 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 RNF223E7ERA6 249 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 UBE2D3P61077 147 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 UBE2D2P62837 147 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 C9orf47Q6ZRZ4 202 aa9.69□□□□□ -0.86
CTCFL-204ENST00000422869 LINC01548A6NM66 108 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 B5MCH6 92 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 LY6HO94772 140 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 SPINK8P0C7L1 97 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
CTCFL-204ENST00000422869 PTH2Q96A98 100 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
CTCFL-204ENST00000422869 CD3EP07766 207 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 CD7P09564 240 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 PSMB2P49721 201 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 XGP55808 180 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 VKORC1Q9BQB6 163 aa9.68□□□□□ -0.86
CTCFL-204ENST00000422869 SPRY2O43597 315 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 PRTN3P24158 256 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 FAM110AQ9BQ89 295 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 IGHV3-49A0A0A0MS15 119 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 C2orf66Q6UXQ4 117 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 Q6ZUT4 128 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 DEFB123Q8N688 67 aa9.67□□□□□ -0.86
CTCFL-204ENST00000422869 HRNRQ86YZ3 2850 aaPredicted RBP9.67□□□□□ -0.86
CTCFL-204ENST00000422869 M0R1W7 72 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 SCGB1D4Q6XE38 83 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 MRPL53Q96EL3 112 aaKnown RBP9.66□□□□□ -0.86
CTCFL-204ENST00000422869 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 M0QXV9 152 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 IGF1P05019 195 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 EBI3Q14213 229 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 VMO1Q7Z5L0 202 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 KLHL30-AS1Q8NEE0 82 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 CENPVL3A0A0U1RRI6 287 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 RPL32P62910 135 aaKnown RBP9.66□□□□□ -0.86
CTCFL-204ENST00000422869 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
CTCFL-204ENST00000422869 Q8N9W7 124 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 RNF183Q96D59 192 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 SPXQ9BT56 116 aa9.66□□□□□ -0.86
CTCFL-204ENST00000422869 ACACAQ13085 2346 aa9.65□□□□□ -0.86
CTCFL-204ENST00000422869 M0R381 172 aa9.65□□□□□ -0.86
CTCFL-204ENST00000422869 CRYGDP07320 174 aa9.65□□□□□ -0.86
CTCFL-204ENST00000422869 FAM110DQ8TAY7 271 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-204ENST00000422869 ECSCRQ19T08 205 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms