RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 APCSP02743 223 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 CAMPP49913 170 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 ERCC8Q13216 396 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 SAPCD1Q5SSQ6 148 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 DNLZQ5SXM8 178 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 SAMD13Q5VXD3 122 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 MRPL53Q96EL3 112 aaKnown RBP6.67□□□□□ -1.34
HPS4-204ENST00000422379 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
HPS4-204ENST00000422379 SH2D1AO60880 128 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 IGLL1P15814 213 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 SRIP30626 198 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 HBBP68871 147 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 Q0VG73 95 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 TMEM18Q96B42 140 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
HPS4-204ENST00000422379 RBAKDNA6NC62 111 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 TSTD3H0UI37 97 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 SERF1AO75920 110 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 ZNF80P51504 273 aaPredicted RBP6.66□□□□□ -1.34
HPS4-204ENST00000422379 FOXA3P55318 350 aaPredicted RBP6.66□□□□□ -1.34
HPS4-204ENST00000422379 ODF3L2Q3SX64 289 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
HPS4-204ENST00000422379 ESDP10768 282 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 PKIAP61925 76 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 FAM162BQ5T6X4 162 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 NDFIP1Q9BT67 221 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 WFDC10AQ9H1F0 79 aa6.65□□□□□ -1.34
HPS4-204ENST00000422379 AGRNO00468 2067 aa6.65□□□□□ -1.35
HPS4-204ENST00000422379 TMSB15BA0A087X1C1 80 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 CD7P09564 240 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 CD33P20138 364 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 APRG1Q8IVJ8 170 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 RCHY1Q96PM5 261 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 SPAG8Q99932 426 aaPredicted RBP6.64□□□□□ -1.35
HPS4-204ENST00000422379 AGPAT4-IT1Q9H0P7 198 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 MAP6D1Q9H9H5 199 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 C19orf73Q9NVV2 129 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 TRAV25A0A0B4J276 109 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 TMEM189A5PLL7 270 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 ID1P41134 155 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 DEFB131AP59861 70 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 KIR3DS1Q14943 382 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
HPS4-204ENST00000422379 BEAN1Q3B7T3 259 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 Q6ZQT7 251 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
HPS4-204ENST00000422379 TRAV2A0A0B4J234 112 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 KNCNA6PVL3 124 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 IQCJQ1A5X6 159 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 Q6AWC8 147 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 OR8A1Q8NGG7 326 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 ALKBH7Q9BT30 221 aaPredicted RBP6.63□□□□□ -1.35
HPS4-204ENST00000422379 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
HPS4-204ENST00000422379 MEGF8Q7Z7M0 2845 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 RBMY1BA6NDE4 496 aaKnown RBP6.62□□□□□ -1.35
HPS4-204ENST00000422379 RBMY1EA6NEQ0 496 aaKnown RBP6.62□□□□□ -1.35
HPS4-204ENST00000422379 WIPF1O43516 503 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 RBMY1DP0C7P1 496 aaKnown RBP6.62□□□□□ -1.35
HPS4-204ENST00000422379 ZNF138P52744 262 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 PAFAH1B2P68402 229 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 TNP2Q05952 138 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 TMEM78Q5T7P6 136 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 PRR9Q5T870 116 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 C9orf47Q6ZRZ4 202 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 LINC00469Q8N7U9 141 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 A0A0J9YX75 114 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 OR4C46A6NHA9 309 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 FABP5P3A8MUU1 101 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 IGKV3-20P01619 116 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 KRTAP10-11P60412 298 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 SNRPD3P62318 126 aaKnown RBP6.62□□□□□ -1.35
HPS4-204ENST00000422379 HIST1H1AQ02539 215 aaPredicted RBP6.62□□□□□ -1.35
HPS4-204ENST00000422379 RIGQ13278 110 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 C9orf66Q5T8R8 295 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 LYZL1Q6UWQ5 148 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 OR10J6PQ8NGY7 276 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 KCNS1Q96KK3 526 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 FAM19A4Q96LR4 140 aa6.62□□□□□ -1.35
HPS4-204ENST00000422379 RPS20P60866 119 aaKnown RBP6.61□□□□□ -1.35
HPS4-204ENST00000422379 AMTNQ6UX39 209 aa6.61□□□□□ -1.35
HPS4-204ENST00000422379 GATD1Q8NB37 220 aa6.61□□□□□ -1.35
HPS4-204ENST00000422379 OR2K2Q8NGT1 345 aa6.61□□□□□ -1.35
HPS4-204ENST00000422379 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
HPS4-204ENST00000422379 LOC102724200A0A096LPH7 203 aaPredicted RBP6.6□□□□□ -1.35
HPS4-204ENST00000422379 A0A1B0GW15 77 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 ORM1P02763 201 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 GPX1P07203 203 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
HPS4-204ENST00000422379 DDTP30046 118 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms