RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SOHLH1Q5JUK2 328 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 UQCC3Q6UW78 93 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 SDF2L1Q9HCN8 221 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 BIN3Q9NQY0 253 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 STAB2Q8WWQ8 2551 aa12.61□□□□□ -0.39
LINC00271-201ENST00000421378 SFTA3P0C7M3 94 aa12.6□□□□□ -0.39
LINC00271-201ENST00000421378 OCC1Q8TAD7 63 aa12.6□□□□□ -0.39
LINC00271-201ENST00000421378 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
LINC00271-201ENST00000421378 ORM1P02763 201 aa12.6□□□□□ -0.39
LINC00271-201ENST00000421378 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
LINC00271-201ENST00000421378 IGKV3D-20A0A0C4DH25 116 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 K7EN84 100 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 M0R036 132 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 TYMSP04818 313 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 OR5I1Q13606 314 aa12.59□□□□□ -0.39
LINC00271-201ENST00000421378 IBA57Q5T440 356 aaKnown RBP12.59□□□□□ -0.39
LINC00271-201ENST00000421378 DAZAP1Q96EP5 407 aaKnown RBP12.59□□□□□ -0.39
LINC00271-201ENST00000421378 SNURFLB1AK76 121 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 B4DEV8 164 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 LINC01551Q86U37 167 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
LINC00271-201ENST00000421378 GNRH2O43555 120 aa12.57□□□□□ -0.4
LINC00271-201ENST00000421378 ZNF415Q09FC8 603 aa12.57□□□□□ -0.4
LINC00271-201ENST00000421378 TMEM241Q24JQ0 296 aa12.57□□□□□ -0.4
LINC00271-201ENST00000421378 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
LINC00271-201ENST00000421378 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
LINC00271-201ENST00000421378 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
LINC00271-201ENST00000421378 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 TCL1AP56279 114 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 P01737 135 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 FAM222AQ5U5X8 452 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 NOP10Q9NPE3 64 aaKnown RBP12.56□□□□□ -0.4
LINC00271-201ENST00000421378 DKK2Q9UBU2 259 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 CELA1Q9UNI1 258 aa12.56□□□□□ -0.4
LINC00271-201ENST00000421378 TMSB15BA0A087X1C1 80 aa12.55□□□□□ -0.4
LINC00271-201ENST00000421378 TEX48A0A1B0GUV7 120 aa12.55□□□□□ -0.4
LINC00271-201ENST00000421378 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
LINC00271-201ENST00000421378 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
LINC00271-201ENST00000421378 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
LINC00271-201ENST00000421378 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
LINC00271-201ENST00000421378 LYRM9A8MSI8 78 aa12.54□□□□□ -0.4
LINC00271-201ENST00000421378 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
LINC00271-201ENST00000421378 ASIPP42127 132 aa12.54□□□□□ -0.4
LINC00271-201ENST00000421378 RPL23P62829 140 aaKnown RBP12.54□□□□□ -0.4
LINC00271-201ENST00000421378 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
LINC00271-201ENST00000421378 C11orf45Q8TAV5 145 aa12.54□□□□□ -0.4
LINC00271-201ENST00000421378 TMEM218A2RU14 115 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 ERVFC1-1P60608 527 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 ADIRFQ15847 76 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 NUDT11Q96G61 164 aa12.53□□□□□ -0.4
LINC00271-201ENST00000421378 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.4
LINC00271-201ENST00000421378 FAM231DQ6ZW35 169 aa12.52□□□□□ -0.4
LINC00271-201ENST00000421378 OR2D3Q8NGH3 330 aa12.52□□□□□ -0.4
LINC00271-201ENST00000421378 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
LINC00271-201ENST00000421378 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
LINC00271-201ENST00000421378 ISOC2Q96AB3 205 aa12.52□□□□□ -0.41
LINC00271-201ENST00000421378 SPXQ9BT56 116 aa12.52□□□□□ -0.41
LINC00271-201ENST00000421378 F8W036 122 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 H3BVH4 76 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 CXCL1P09341 107 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 DNLZQ5SXM8 178 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 C9orf85Q96MD7 179 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
LINC00271-201ENST00000421378 IL36BQ9NZH7 164 aa12.51□□□□□ -0.41
LINC00271-201ENST00000421378 TRGV1A0A0A0MS02 117 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 XKRY2A2RUG3 117 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 SPINK4O60575 86 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 NANOS2P60321 138 aaKnown RBP12.5□□□□□ -0.41
LINC00271-201ENST00000421378 RPS20P60866 119 aaKnown RBP12.5□□□□□ -0.41
LINC00271-201ENST00000421378 LGALS9BQ3B8N2 356 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
LINC00271-201ENST00000421378 M0R2P5 195 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 DAD1P61803 113 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 PNRC1Q12796 327 aaPredicted RBP12.49□□□□□ -0.41
LINC00271-201ENST00000421378 Q6ZTI0 123 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 C15orf54Q8N8G6 183 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 SEC11CQ9BY50 192 aa12.49□□□□□ -0.41
LINC00271-201ENST00000421378 MRPL16Q9NX20 251 aaKnown RBP12.49□□□□□ -0.41
LINC00271-201ENST00000421378 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
LINC00271-201ENST00000421378 C12orf74Q32Q52 190 aa12.48□□□□□ -0.41
LINC00271-201ENST00000421378 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
LINC00271-201ENST00000421378 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
LINC00271-201ENST00000421378 GAGE7O76087 117 aa12.47□□□□□ -0.41
LINC00271-201ENST00000421378 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
LINC00271-201ENST00000421378 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
LINC00271-201ENST00000421378 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms