RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 RNASE10Q5GAN6 216 aaKnown RBP3.65□□□□□ -1.83
LMBR1-204ENST00000415428 TMEM268Q5VZI3 342 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 C15orf56Q8N910 161 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 TCEAL7Q9BRU2 100 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 VCXQ9H320 206 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 IL36BQ9NZH7 164 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 TRAV21A0A0B4J279 112 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 DISC1C4P0D8 188 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 SFT2D2O95562 160 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 IZUMO4Q1ZYL8 232 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 FAM229BQ4G0N7 80 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 TMEM128Q5BJH2 165 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 LINC00305Q7Z4B0 112 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 DYNC2LI1Q8TCX1 351 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 SAMD10Q9BYL1 202 aa3.65□□□□□ -1.83
LMBR1-204ENST00000415428 C14orf166Q9Y224 244 aaKnown RBP3.65□□□□□ -1.83
LMBR1-204ENST00000415428 STRAPQ9Y3F4 350 aaKnown RBP3.65□□□□□ -1.83
LMBR1-204ENST00000415428 ANXA3P12429 323 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 HAMPP81172 84 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 RAB31Q13636 194 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 IL18Q14116 193 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 OR4C5Q8NGB2 326 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 TSKUQ8WUA8 353 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 RPP21Q9H633 154 aaKnown RBP3.64□□□□□ -1.83
LMBR1-204ENST00000415428 TSPAN5P62079 268 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 RHOBP62745 196 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 OR4D10Q8NGI6 311 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 SLC25A21Q9BQT8 299 aaPredicted RBP3.64□□□□□ -1.83
LMBR1-204ENST00000415428 FLVCR2Q9UPI3 526 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 FAM231BA6NCW3 169 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 AGPAT2O15120 278 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 CCL25O15444 150 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 PPT1P50897 306 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 OTORQ9NRC9 128 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 KCNIP3Q9Y2W7 256 aa3.64□□□□□ -1.83
LMBR1-204ENST00000415428 AKAIN1P0CW23 69 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 RPS19P39019 145 aaKnown RBP3.63□□□□□ -1.83
LMBR1-204ENST00000415428 TMEM75Q8N9X5 138 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 SDF2L1Q9HCN8 221 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 COX7A2P2O60397 106 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
LMBR1-204ENST00000415428 MT1HP80294 61 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 MXD1Q05195 221 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 C10orf113Q5VZT2 155 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 PGPA6NDG6 321 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 CD3DP04234 171 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 CLEC2LP0C7M8 214 aa3.63□□□□□ -1.83
LMBR1-204ENST00000415428 CCDC59Q9P031 241 aaKnown RBP3.63□□□□□ -1.83
LMBR1-204ENST00000415428 IGKV2-40A0A087WW87 121 aaPredicted RBP3.62□□□□□ -1.83
LMBR1-204ENST00000415428 LOC100131303A0A0U1RQF7 123 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 RGS13O14921 159 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 IGKV2D-40P01614 121 aaPredicted RBP3.62□□□□□ -1.83
LMBR1-204ENST00000415428 SPINK9Q5DT21 86 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 DAZ4Q86SG3 579 aaKnown RBP3.62□□□□□ -1.83
LMBR1-204ENST00000415428 SLIRPQ9GZT3 109 aaKnown RBP3.62□□□□□ -1.83
LMBR1-204ENST00000415428 ARL2-SNX15V9GYD0 113 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 SNAI2O43623 268 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 TRIM16LQ309B1 348 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 KCNIP2Q9NS61 270 aa3.62□□□□□ -1.83
LMBR1-204ENST00000415428 NUPR1O60356 82 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 XP32Q5T750 250 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 TMEM78Q5T7P6 136 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 TVP23CQ96ET8 276 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 ARPC5LQ9BPX5 153 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
LMBR1-204ENST00000415428 LINC01559Q495D7 138 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 LYZL2Q7Z4W2 148 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 ASB13Q8WXK3 278 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 C20orf85Q9H1P6 137 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 VCX3BQ9H321 246 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 EXTL2Q9UBQ6 330 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 C4orf48Q5BLP8 95 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 PBDC1Q9BVG4 233 aa3.61□□□□□ -1.83
LMBR1-204ENST00000415428 MRPS26Q9BYN8 205 aaKnown RBP3.61□□□□□ -1.83
LMBR1-204ENST00000415428 RAB3DO95716 219 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 MZT2AQ6P582 158 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 NCR2O95944 276 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 OR10J3Q5JRS4 329 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 CFAP161Q6P656 301 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 FAM24AA6NFZ4 105 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 A6NHS1 94 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 IGLV7-43P04211 117 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 GPX1P07203 203 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 HLA-DMAP28067 261 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 C1orf43Q9BWL3 253 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 TIMM9Q9Y5J7 89 aa3.6□□□□□ -1.83
LMBR1-204ENST00000415428 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
LMBR1-204ENST00000415428 MBPP02686 304 aaPredicted RBP3.59□□□□□ -1.83
LMBR1-204ENST00000415428 PGAM2P15259 253 aa3.59□□□□□ -1.83
LMBR1-204ENST00000415428 RNASE4P34096 147 aaKnown RBP3.59□□□□□ -1.83
LMBR1-204ENST00000415428 LINC01561Q8N1V8 128 aa3.59□□□□□ -1.83
LMBR1-204ENST00000415428 FAM107BQ9H098 131 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms